Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007746g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-103 378.6 185 100.0
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-51 204.9 220 56.8
Nitab4.5_0007170g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-47 192.2 187 57.8
Nitab4.5_0004222g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-43 177.9 193 56.5
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-37 157.5 193 50.3
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-34 149.8 208 41.3
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-30 136.0 206 42.7
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-29 131.3 182 48.9
Nitab4.5_0001115g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-28 127.9 187 46.0
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-26 122.9 102 62.7
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-23 111.7 195 42.6
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-21 105.9 185 38.9
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-20 102.4 176 40.3
Nitab4.5_0000022g0420 Nicotiana tabacum HOM05D000995 ORTHO05D001773 1.4e-19 100.5 60 80.0
Nitab4.5_0009953g0030 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.4e-19 100.5 59 86.4
Nitab4.5_0011788g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-19 99.0 59 83.1
Nitab4.5_0022442g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-19 98.2 110 54.5
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-18 97.1 189 34.4
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-17 93.2 193 33.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-17 92.8 56 80.4
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-17 92.8 77 66.2
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-16 90.1 166 38.0
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-16 89.4 59 76.3
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-16 88.2 166 38.0
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-16 88.2 178 36.0
Nitab4.5_0008324g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-16 88.2 135 40.7
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-15 87.0 68 58.8
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-15 86.3 91 46.2
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 4.7e-15 85.5 68 54.4
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-15 85.1 59 69.5
Nitab4.5_0011092g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-15 84.7 145 37.2
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-14 83.2 68 55.9
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-14 83.2 52 78.8
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-14 82.4 68 55.9
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 5.2e-14 82.0 68 54.4
Nitab4.5_0021362g0010 Nicotiana tabacum HOM05D003911 ORTHO05D001773 8.8e-14 81.3 51 76.5
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 80.9 215 32.1
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-13 80.5 69 56.5
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-13 80.5 68 55.9
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-13 80.5 59 69.5
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-13 80.5 68 54.4
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-13 79.7 174 36.8
Nitab4.5_0002897g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-13 78.6 123 41.5
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-13 78.6 71 52.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 7.5e-13 78.2 181 32.0
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-13 78.2 68 54.4
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-12 77.0 68 51.5
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-12 76.6 67 52.2
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.8e-12 76.3 68 51.5
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-12 75.5 59 66.1
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 6.3e-12 75.1 68 51.5
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-12 74.7 68 51.5
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-11 74.3 68 51.5
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-11 73.9 62 54.8
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-11 73.6 68 47.1
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-11 73.6 68 48.5
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-11 73.2 158 37.3
Nitab4.5_0004708g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-11 73.2 52 73.1
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 2.4e-11 73.2 63 54.0
Nitab4.5_0003598g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-11 72.4 63 63.5
Nitab4.5_0000026g0220 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-11 72.0 72 55.6
Nitab4.5_0000362g0190 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-11 72.0 68 51.5
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-11 71.6 133 34.6
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.1e-11 71.2 68 47.1
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.9 68 48.5
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.9 61 54.1
Nitab4.5_0000936g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.9 68 50.0
Nitab4.5_0000304g0100 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 70.5 53 67.9
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-10 70.5 68 47.1
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-10 70.1 62 53.2
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.0e-10 70.1 68 47.1
Nitab4.5_0001502g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 69.7 38 86.8
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-10 69.3 172 33.1
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.5e-10 68.9 68 45.6
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-10 68.2 61 50.8
Nitab4.5_0000003g0320 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-09 67.8 68 47.1
Nitab4.5_0000903g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-09 67.4 97 40.2
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-09 66.6 61 54.1
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-09 64.7 41 78.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-08 63.2 115 37.4
Nitab4.5_0007148g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-08 62.8 59 55.9
SalBow6G6357 Salvia bowleyana HOM05D003574 ORTHO05D002175 4.2e-08 62.4 68 44.1
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-08 61.6 51 54.9
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-07 60.8 196 31.1
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-07 60.8 127 34.6
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-07 59.3 138 34.8
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 3.6e-07 59.3 51 52.9
SalBow6G1622 Salvia bowleyana HOM05D004781 ORTHO05D001773 3.6e-07 59.3 68 41.2
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-07 58.9 52 51.9
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-07 58.9 59 47.5
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.7e-07 58.9 62 46.8
SalBow6G5430 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.3e-06 56.6 68 41.2
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.3e-06 56.6 68 41.2
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-06 56.2 52 50.0
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 3.0e-06 56.2 68 41.2
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-06 55.5 144 36.8
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.2e-06 55.5 62 40.3
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-06 54.7 38 68.4


User provided reference genes

Program Settings