Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 8.8e-66 253.4 126 100.0
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 4.5e-62 241.1 124 96.0
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 5.0e-61 237.7 125 95.2
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 5.0e-61 237.7 125 95.2
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 7.2e-60 233.8 125 94.4
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 3.6e-59 231.5 124 92.7
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 4.3e-52 208.0 124 83.1
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 1.2e-51 206.5 125 83.2
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 2.1e-51 205.7 128 81.2
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 4.7e-51 204.5 127 81.9
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 8.0e-51 203.8 126 81.7
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.8e-50 202.6 128 78.9
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 4.0e-50 201.4 124 79.8
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 8.9e-50 200.3 125 80.0
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.2e-49 199.9 124 77.4
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 2.6e-49 198.7 129 78.3
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 2.6e-49 198.7 128 80.5
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 9.8e-49 196.8 131 79.4
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 9.8e-49 196.8 122 82.0
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 9.8e-49 196.8 124 77.4
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 1.7e-48 196.1 127 77.2
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 2.2e-48 195.7 126 78.6
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 2.2e-48 195.7 126 78.6
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 2.2e-48 195.7 128 78.9
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 2.2e-48 195.7 125 78.4
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 1.4e-47 193.0 124 79.8
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.9e-47 192.6 133 74.4
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 2.4e-47 192.2 129 75.2
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 4.1e-47 191.4 128 76.6
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 4.1e-47 191.4 126 77.0
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 4.1e-47 191.4 127 78.0
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 7.0e-47 190.7 129 75.2
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 9.2e-47 190.3 131 77.1
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 1.2e-46 189.9 128 75.8
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 1.2e-46 189.9 130 71.5
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 1.2e-46 189.9 131 75.6
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.6e-46 189.5 128 76.6
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 1.6e-46 189.5 120 79.2
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 2.0e-46 189.1 129 76.0
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 2.0e-46 189.1 127 74.8
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 2.0e-46 189.1 130 72.3
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 2.7e-46 188.7 128 74.2
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.7e-46 188.7 119 77.3
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 3.5e-46 188.3 128 74.2
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 3.5e-46 188.3 112 81.2
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 3.5e-46 188.3 129 76.0
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 4.6e-46 188.0 130 76.2
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 7.8e-46 187.2 96 92.7
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 1.0e-45 186.8 129 75.2
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 1.0e-45 186.8 131 73.3
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 1.7e-45 186.0 135 72.6
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.7e-45 186.0 119 76.5
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 3.9e-45 184.9 130 76.9
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 5.0e-45 184.5 119 79.8
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 5.0e-45 184.5 115 80.9
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 5.0e-45 184.5 122 77.0
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 1.1e-44 183.3 129 74.4
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 1.5e-44 183.0 123 77.2
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 1.9e-44 182.6 128 75.0
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 2.5e-44 182.2 105 83.8
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 5.6e-44 181.0 114 79.8
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 9.5e-44 180.3 100 86.0
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 9.5e-44 180.3 129 70.5
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 1.6e-43 179.5 112 78.6
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 2.1e-43 179.1 127 71.7
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 4.7e-43 177.9 126 73.8
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 6.2e-43 177.6 129 71.3
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 1.4e-42 176.4 112 75.9
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 1.4e-42 176.4 95 87.4
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 5.2e-42 174.5 110 80.0
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 8.9e-42 173.7 112 75.0
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.5e-41 172.9 107 78.5
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.5e-41 172.9 116 75.9
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 2.6e-41 172.2 125 72.8
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 2.6e-41 172.2 125 72.8
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 2.2e-40 169.1 105 76.2
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 3.7e-40 168.3 123 70.7
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 3.7e-40 168.3 92 83.7
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 7.1e-39 164.1 124 70.2
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 1.2e-38 163.3 124 69.4
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 1.6e-38 162.9 120 70.0
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 1.7e-37 159.5 85 89.4
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 4.7e-35 151.4 90 77.8
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 2.6e-33 145.6 85 77.6
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 4.1e-31 138.3 157 49.7
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 4.6e-30 134.8 90 72.2
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 4.6e-30 134.8 88 76.1
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 6.6e-29 131.0 85 76.5
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 2.5e-28 129.0 86 76.7
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 3.6e-27 125.2 89 66.3
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 8.1e-27 124.0 95 70.5
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.6e-25 119.0 125 56.8
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 6.0e-22 107.8 83 69.9
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 2.3e-21 105.9 99 64.6
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 2.5e-20 102.4 78 69.2
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 3.3e-20 102.1 78 69.2
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 6.2e-19 97.8 78 67.9
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.4e-18 96.7 79 64.6
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 4.4e-17 91.7 77 62.3
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 4.4e-17 91.7 85 62.4
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 7.6e-17 90.9 86 60.5
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 8.4e-16 87.4 82 58.5
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 2.4e-15 85.9 41 90.2
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 4.2e-15 85.1 84 58.3
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 1.2e-14 83.6 50 84.0
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 7.6e-09 64.3 42 71.4
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 3.2e-07 58.9 88 44.3


User provided reference genes

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