Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 9.5e-104 380.2 191 100.0
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.9e-72 276.2 280 60.7
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.0e-36 157.5 100 86.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 1.7e-36 156.8 98 87.8
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.1e-34 149.8 98 83.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.6e-32 142.9 103 80.6
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.5e-27 126.3 104 74.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 5.7e-24 115.2 120 57.5
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 5.9e-21 105.1 121 54.5
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.0e-20 104.4 101 61.4
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 2.7e-18 96.3 100 58.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 4.7e-18 95.5 123 46.3
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 6.1e-18 95.1 86 59.3
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 8.0e-18 94.7 74 68.9
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.0e-17 94.4 104 51.9
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.4e-17 94.0 87 58.6
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.3e-17 93.2 88 59.1
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.7e-17 91.7 110 50.0
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 8.8e-17 91.3 91 57.1
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 8.8e-17 91.3 106 50.0
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 8.8e-17 91.3 108 50.0
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 8.8e-17 91.3 98 52.0
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 8.8e-17 91.3 94 53.2
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.2e-16 90.9 91 54.9
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.2e-16 90.9 95 54.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.5e-16 90.5 94 56.4
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.5e-16 90.5 80 60.0
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 2.0e-16 90.1 82 61.0
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.6e-16 89.7 120 48.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 2.6e-16 89.7 106 50.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.3e-16 89.4 82 58.5
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 4.4e-16 89.0 114 47.4
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 5.7e-16 88.6 115 47.0
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 7.5e-16 88.2 84 58.3
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 9.7e-16 87.8 84 56.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.3e-15 87.4 127 44.9
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.3e-15 87.4 63 71.4
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.7e-15 87.0 99 47.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.7e-15 87.0 91 54.9
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.2e-15 86.7 119 44.5
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.2e-15 86.7 65 67.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.2e-15 86.7 65 67.7
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.2e-15 86.7 65 67.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.8e-15 86.3 95 54.7
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 2.8e-15 86.3 102 52.0
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 2.8e-15 86.3 64 68.8
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.8e-15 86.3 85 51.8
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 3.7e-15 85.9 95 55.8
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.7e-15 85.9 65 67.7
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.7e-15 85.9 108 47.2
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.7e-15 85.9 107 48.6
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 6.3e-15 85.1 81 58.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 8.2e-15 84.7 87 51.7
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 8.2e-15 84.7 120 46.7
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.1e-14 84.3 70 61.4
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.4e-14 84.0 86 52.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.4e-14 84.0 80 56.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.8e-14 83.6 68 64.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.8e-14 83.6 93 47.3
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.8e-14 83.6 107 44.9
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.8e-14 83.6 79 55.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 4.1e-14 82.4 93 52.7
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 4.1e-14 82.4 122 42.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 5.3e-14 82.0 71 59.2
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 5.3e-14 82.0 86 50.0
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 5.3e-14 82.0 107 43.0
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.0e-14 81.6 71 59.2
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 7.0e-14 81.6 71 59.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.6e-13 80.5 91 46.2
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 2.7e-13 79.7 90 48.9
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 2.7e-13 79.7 70 58.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.7e-13 79.7 96 46.9
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 3.5e-13 79.3 67 58.2
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.5e-13 79.3 67 58.2
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.5e-13 79.3 67 58.2
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 3.5e-13 79.3 91 52.7
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 3.5e-13 79.3 92 48.9
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 3.5e-13 79.3 114 43.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 4.5e-13 79.0 86 51.2
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.0e-12 77.8 92 46.7
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.3e-12 77.4 82 50.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.3e-12 77.4 95 45.3
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.3e-12 77.4 95 45.3
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.3e-12 77.4 101 48.5
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 2.2e-12 76.6 118 43.2
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 2.2e-12 76.6 106 43.4
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 3.8e-12 75.9 100 44.0
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.8e-12 75.9 91 47.3
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 5.0e-12 75.5 99 45.5
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 6.5e-12 75.1 72 51.4
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 8.5e-12 74.7 84 45.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-11 73.9 83 53.0
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.2e-11 72.8 47 76.6
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.2e-11 72.4 100 43.0
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.2e-11 72.4 100 43.0
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.2e-11 72.4 75 50.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 9.4e-11 71.2 88 44.3
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.2e-10 70.9 87 43.7
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.6e-10 70.5 75 46.7
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.7e-10 69.7 118 33.9
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.6e-10 69.3 129 36.4
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 4.7e-10 68.9 91 40.7
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.4e-09 67.4 50 68.0
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 4.0e-09 65.9 61 55.7
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.0e-08 63.5 61 52.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 2.0e-08 63.5 99 38.4
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 6.3e-07 58.5 63 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 8.3e-07 58.2 62 43.5


User provided reference genes

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