Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007729g0030 Nicotiana tabacum HOM05D014506 ORTHO05D017765 7.6e-46 188.0 210 100.0
Nitab4.5_0011824g0010 Nicotiana tabacum HOM05D014506 ORTHO05D017765 9.6e-33 144.4 190 98.9
PGSC0003DMG400028473 Solanum tuberosum HOM05D000021 ORTHO05D000010 3.2e-28 129.4 83 77.1
PGSC0003DMG400028474 Solanum tuberosum HOM05D000021 ORTHO05D000010 4.5e-22 109.0 189 91.0
CAN.G257.124 Capsicum annuum HOM05D000065 ORTHO05D017765 7.7e-22 108.2 83 67.5
Peaxi162Scf00162g00211 Petunia axillaris HOM05D014506 ORTHO05D017765 1.0e-21 107.8 69 79.7
CAN.G411.75 Capsicum annuum HOM05D000021 ORTHO05D000010 6.5e-21 105.1 190 39.5
Solyc02g072400.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 6.5e-21 105.1 189 89.4
Sopen02g021350 Solanum pennellii HOM05D000021 ORTHO05D000010 6.5e-21 105.1 190 90.0
Nitab4.5_0001424g0030 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.7e-19 99.8 208 82.7
Nitab4.5_0002684g0030 Nicotiana tabacum HOM05D014506 ORTHO05D017765 1.5e-17 94.0 67 74.6
Nitab4.5_0002185g0130 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.3e-17 92.8 51 88.2
Nitab4.5_0003736g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.7e-17 92.0 187 52.4
Nitab4.5_0007564g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 6.3e-16 88.6 52 84.6
CAN.G411.79 Capsicum annuum HOM05D000021 ORTHO05D000010 2.1e-11 73.6 43 76.7
Nitab4.5_0002185g0100 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.0e-10 71.2 187 33.2
Cc09_g06840 Coffea canephora HOM05D018220 ORTHO05D025129 8.8e-10 68.2 82 36.6
MD10G1277600 Malus domestica HOM05D000021 ORTHO05D000010 9.7e-09 64.7 73 42.5
ATR0602G217 Amborella trichopoda HOM05D000029 ORTHO05D001395 6.3e-08 62.0 78 47.4
Migut.F01644 Erythranthe guttata HOM05D000053 ORTHO05D000035 6.3e-08 62.0 86 38.4
TAR383G0373 Trochodendron aralioides HOM05D000021 ORTHO05D000010 1.8e-07 60.5 71 36.6
Peaxi162Scf00205g00723 Petunia axillaris HOM05D000021 ORTHO05D012344 2.4e-07 60.1 78 41.0
SalBow7G0903 Salvia bowleyana HOM05D000071 ORTHO05D000029 2.4e-07 60.1 78 39.7
CAN.G866.1 Capsicum annuum HOM05D000021 ORTHO05D000010 3.1e-07 59.7 61 42.6
AUR62031262 Chenopodium quinoa HOM05D000021 ORTHO05D000010 3.1e-07 59.7 62 48.4
ECA238G2109 Erigeron canadensis HOM05D000021 ORTHO05D000010 4.1e-07 59.3 66 50.0
Cc00_g26510 Coffea canephora HOM05D000021 ORTHO05D000010 5.3e-07 58.9 54 51.9
Nitab4.5_0002185g0040 Nicotiana tabacum HOM05D000021 ORTHO05D000010 5.3e-07 58.9 29 89.7
HanXRQChr06g0165281 Helianthus annuus HOM05D000021 ORTHO05D000010 7.0e-07 58.5 71 42.3
Lsat_1_v5_gn_6_108000 Lactuca sativa HOM05D000029 ORTHO05D005879 7.0e-07 58.5 62 41.9
SalBow6G4279 Salvia bowleyana HOM05D000021 ORTHO05D000010 9.1e-07 58.2 65 47.7
SalBow7G3001 Salvia bowleyana HOM05D000071 ORTHO05D000029 9.1e-07 58.2 78 38.5
Os09g0293500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D001414 1.2e-06 57.8 68 41.2
SalBow7G4068 Salvia bowleyana HOM05D000071 ORTHO05D000029 1.2e-06 57.8 78 34.6
CAN.G1267.1 Capsicum annuum HOM05D016353 ORTHO05D017748 1.5e-06 57.4 76 38.2
COL.COLO4_09595 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.5e-06 57.4 81 43.2
Nitab4.5_0000030g0300 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.0e-06 57.0 66 39.4
Eucgr.C03748 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.6e-06 56.6 71 40.8
PGSC0003DMG401026747 Solanum tuberosum HOM05D000021 ORTHO05D024768 2.6e-06 56.6 51 51.0
SalBow7G0233 Salvia bowleyana HOM05D000071 ORTHO05D000029 3.5e-06 56.2 78 35.9
CSS0025578 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 4.5e-06 55.8 74 36.5
Ciclev10024087m.g Citrus clementina HOM05D000053 ORTHO05D000035 4.5e-06 55.8 78 44.9
Cc00_g14070 Coffea canephora HOM05D000021 ORTHO05D000010 4.5e-06 55.8 29 86.2
Solyc03g006100.4 Solanum lycopersicum HOM05D000021 ORTHO05D000010 4.5e-06 55.8 55 50.9
TPR.G30040 Trifolium pratense HOM05D000021 ORTHO05D000010 4.5e-06 55.8 74 44.6
Duzib106G1509 Durio zibethinus HOM05D014506 ORTHO05D017765 5.9e-06 55.5 28 89.3
Nitab4.5_0000377g0010 Nicotiana tabacum HOM05D000029 ORTHO05D005879 5.9e-06 55.5 62 43.5
SEGI_35620 Sequoiadendron giganteum HOM05D000029 ORTHO05D002500 5.9e-06 55.5 71 42.3
HanXRQChr05g0131971 Helianthus annuus HOM05D000021 ORTHO05D000010 7.7e-06 55.1 79 38.0
Pp3c14_15390 Physcomitrium patens HOM05D000094 ORTHO05D001056 7.7e-06 55.1 57 42.1


User provided reference genes

Program Settings