Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.1e-117 426.8 229 100.0
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.9e-106 389.4 229 91.7
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 5.5e-74 281.6 230 70.0
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 1.0e-72 277.3 230 69.6
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 1.8e-64 250.0 202 67.8
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 9.8e-55 217.6 148 75.0
Peaxi162Scf00935g00006 Petunia axillaris HOM05D007925 ORTHO05D009727 7.0e-45 184.9 157 67.5
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 2.6e-39 166.4 229 48.0
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 8.3e-30 134.8 227 44.5
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 3.6e-25 119.4 234 40.2
Oeu042669.1 Olea europaea HOM05D007925 ORTHO05D009727 2.7e-20 103.2 235 39.6
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 1.7e-19 100.5 223 33.2
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 7.3e-18 95.1 199 36.2
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 9.6e-18 94.7 234 33.8
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 1.6e-17 94.0 219 35.2
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 1.6e-17 94.0 232 36.2
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 2.1e-17 93.6 234 35.5
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 6.2e-17 92.0 230 35.7
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 1.1e-16 91.3 236 33.9
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.4e-16 90.9 242 37.2
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 3.1e-16 89.7 233 34.8
Sed0014435 Sechium edule HOM05D007925 ORTHO05D009727 6.8e-16 88.6 225 35.6
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 1.2e-15 87.8 230 36.1
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 1.5e-15 87.4 232 32.8
CsaV3_6G028540 Cucumis sativus L. HOM05D007925 ORTHO05D009727 1.3e-14 84.3 236 28.8
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 3.8e-14 82.8 145 33.8
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 4.9e-14 82.4 228 32.5
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 4.9e-14 82.4 180 35.0
Migut.B00760 Erythranthe guttata HOM05D007925 ORTHO05D009727 6.4e-14 82.0 234 33.8
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 1.4e-13 80.9 234 35.0
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 1.9e-13 80.5 124 36.3
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 2.4e-13 80.1 221 36.2
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 4.2e-13 79.3 235 32.8
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 4.2e-13 79.3 153 34.6
SalBow8G2554 Salvia bowleyana HOM05D007925 ORTHO05D009727 7.1e-13 78.6 229 30.6
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 9.3e-13 78.2 224 33.9
ECA233G1514 Erigeron canadensis HOM05D007925 ORTHO05D009727 1.2e-12 77.8 283 31.1
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 1.0e-11 74.7 205 33.2
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 1.7e-11 73.9 145 32.4
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 5.1e-11 72.4 253 32.8
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 6.6e-11 72.0 204 31.4
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.5e-10 70.9 230 30.9
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 2.5e-10 70.1 231 30.7
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 7.3e-10 68.6 216 32.4
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 1.6e-09 67.4 211 29.9
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 2.8e-09 66.6 231 29.4
Lsat_1_v5_gn_6_39741 Lactuca sativa HOM05D007925 ORTHO05D009727 2.8e-09 66.6 295 27.5
arahy.Tifrunner.gnm1.ann1.BW1DTW Arachis hypogaea HOM05D007925 ORTHO05D009727 1.4e-08 64.3 186 29.0
arahy.Tifrunner.gnm1.ann1.8N1160 Arachis hypogaea HOM05D007925 ORTHO05D009727 1.8e-08 63.9 190 28.4
Phvul.006G118800 Phaseolus vulgaris HOM05D007925 ORTHO05D009727 2.4e-08 63.5 241 31.5
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 3.1e-08 63.2 231 29.4
Migut.B00759 Erythranthe guttata HOM05D007925 ORTHO05D009727 2.6e-07 60.1 230 30.9
AUR62016227 Chenopodium quinoa HOM05D007925 ORTHO05D009727 7.6e-07 58.5 170 34.1
MELO3C021261.2 Cucumis melo HOM05D007925 ORTHO05D009727 7.6e-07 58.5 224 29.0
ECA234G4268 Erigeron canadensis HOM05D007925 ORTHO05D009727 7.6e-07 58.5 154 27.9
VMungo0540G0187 Vigna mungo HOM05D007925 ORTHO05D009727 9.9e-07 58.2 244 29.1
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 2.2e-06 57.0 238 29.4
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 2.9e-06 56.6 203 26.1
THA.LOC104818879 Tarenaya hassleriana HOM05D011548 ORTHO05D013687 8.4e-06 55.1 51 47.1


User provided reference genes

Program Settings