Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007703g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.6e-36 152.9 74 100.0
Nitab4.5_0007509g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-30 135.6 70 91.4
Nitab4.5_0020633g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.0e-30 133.7 70 87.1
Nitab4.5_0002975g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.3e-29 131.7 70 88.6
Nitab4.5_0013233g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.6e-29 130.2 70 87.1
Nitab4.5_0000212g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.2e-27 123.6 70 80.0
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-26 122.9 70 80.0
Nitab4.5_0006365g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.4e-26 121.7 76 78.9
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.3e-26 120.6 70 81.4
Nitab4.5_0000632g0070 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.9e-26 120.2 70 82.9
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-25 119.4 70 81.4
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.6e-25 118.2 70 78.6
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.4e-25 117.9 70 80.0
Nitab4.5_0012454g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.8e-25 117.1 85 71.8
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.8e-24 114.4 70 74.3
Nitab4.5_0013078g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-23 112.8 61 88.5
Nitab4.5_0000497g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.2e-23 110.9 63 85.7
Nitab4.5_0010449g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-22 108.6 61 85.2
Nitab4.5_0004422g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.5e-22 107.8 62 82.3
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.5e-22 107.8 70 68.6
Nitab4.5_0009232g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.8e-22 106.7 61 83.6
Nitab4.5_0003780g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-21 105.5 70 75.7
Nitab4.5_0014003g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-21 105.5 70 68.6
Nitab4.5_0003330g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-20 102.8 61 82.0
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 1.1e-20 102.8 70 65.7
Nitab4.5_0003435g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.3e-20 101.3 61 80.3
Nitab4.5_0000659g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.3e-20 100.9 60 80.0
Nitab4.5_0000909g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-19 99.4 61 80.3
Nitab4.5_0002444g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-19 99.4 61 78.7
Nitab4.5_0011677g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.8e-19 97.4 54 87.0
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 6.2e-19 97.1 70 62.9
Nitab4.5_0003517g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.1e-19 96.7 54 81.5
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-18 95.9 75 62.7
Nitab4.5_0004881g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-18 95.5 72 62.5
CAN.G453.5 Capsicum annuum HOM05D002441 ORTHO05D008317 4.0e-18 94.4 70 61.4
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.0e-17 92.0 70 60.0
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-16 89.0 70 60.0
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.4e-15 84.0 65 60.0
Nitab4.5_0004430g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-14 82.0 54 72.2
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.7e-14 81.6 61 60.7
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.9e-14 80.1 44 84.1
Nitab4.5_0013898g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-13 79.0 57 63.2
Nitab4.5_0005752g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.3e-12 74.7 61 55.7
Nitab4.5_0008086g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.3e-12 74.7 61 55.7
Nitab4.5_0004405g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.6e-12 73.9 62 53.2
Nitab4.5_0000999g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-11 72.8 61 50.8
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.1e-11 72.0 70 47.1
Nitab4.5_0008011g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-11 72.0 61 50.8
Nitab4.5_0008207g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-11 72.0 61 55.7
Nitab4.5_0006452g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-10 68.9 70 51.4
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.4e-10 68.6 44 70.5
Nitab4.5_0007230g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-09 66.2 52 57.7
Nitab4.5_0000305g0130 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.0e-08 63.2 70 50.0
Nitab4.5_0000935g0200 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.0e-08 63.2 44 65.9
Nitab4.5_0000109g0580 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-08 62.8 52 53.8
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 2.2e-08 62.0 70 41.4
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-08 62.0 62 45.2
arahy.Tifrunner.gnm1.ann1.TD74G4 Arachis hypogaea HOM05D002441 ORTHO05D008317 2.2e-08 62.0 70 41.4
Peaxi162Scf00496g00410 Petunia axillaris HOM05D002441 ORTHO05D008317 2.2e-08 62.0 47 59.6
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 2.9e-08 61.6 65 40.0
Nitab4.5_0006882g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.9e-08 61.6 69 49.3
arahy.Tifrunner.gnm1.ann1.GB31PP Arachis hypogaea HOM05D002441 ORTHO05D008317 3.8e-08 61.2 62 45.2
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 6.5e-08 60.5 66 36.4
arahy.Tifrunner.gnm1.ann1.RLQ2A3 Arachis hypogaea HOM05D002441 ORTHO05D008317 8.4e-08 60.1 68 44.1
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 8.4e-08 60.1 65 36.9
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-07 59.7 65 35.4
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-07 58.9 65 38.5
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-07 58.9 65 38.5
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 1.9e-07 58.9 70 41.4
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-07 58.9 65 38.5
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-07 58.9 65 38.5
Medtr8g467450 Medicago truncatula HOM05D000353 ORTHO05D008317 5.5e-07 57.4 65 35.4
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 7.1e-07 57.0 69 39.1
Nitab4.5_0004069g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-06 56.2 42 61.9
Nitab4.5_0004363g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-06 56.2 29 86.2
Nitab4.5_0007210g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-06 56.2 39 59.0
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 1.6e-06 55.8 66 37.9
arahy.Tifrunner.gnm1.ann1.19G1TH Arachis hypogaea HOM05D002441 ORTHO05D008317 2.1e-06 55.5 59 44.1
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-06 55.1 70 40.0
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 7.9e-06 53.5 70 40.0
AL7G20110 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 7.9e-06 53.5 70 38.6
arahy.Tifrunner.gnm1.ann1.AJ0GPW Arachis hypogaea HOM05D002441 ORTHO05D008317 7.9e-06 53.5 68 38.2
Medtr5g070620 Medicago truncatula HOM05D000353 ORTHO05D008317 7.9e-06 53.5 55 45.5
Medtr8g469510 Medicago truncatula HOM05D000353 ORTHO05D008317 7.9e-06 53.5 62 38.7
Nitab4.5_0001851g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.9e-06 53.5 29 86.2
TPR.G37330 Trifolium pratense HOM05D008036 ORTHO05D008317 7.9e-06 53.5 70 34.3


User provided reference genes

Program Settings