Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007648g0020 Nicotiana tabacum HOM05D001166 ORTHO05D000992 6.8e-45 183.7 100 100.0
Nitab4.5_0001015g0030 Nicotiana tabacum HOM05D001166 ORTHO05D000992 9.9e-28 126.7 78 87.2
Solyc09g020000.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 2.4e-21 105.5 74 79.7
Dinv28778 Davidia involucrata HOM05D001166 ORTHO05D000992 9.0e-21 103.6 73 78.1
Sopen09g012830 Solanum pennellii HOM05D001166 ORTHO05D000992 9.0e-21 103.6 74 78.4
Dinv07641 Davidia involucrata HOM05D001166 ORTHO05D000992 3.4e-20 101.7 73 76.7
Peaxi162Scf00390g00017 Petunia axillaris HOM05D001166 ORTHO05D000992 3.8e-19 98.2 73 67.1
Peaxi162Scf00390g00025 Petunia axillaris HOM05D001166 ORTHO05D000992 2.4e-18 95.5 73 65.8
CSS0014252 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 1.6e-17 92.8 76 77.6
Hma1.2p1_0161F.1_g071800 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 2.1e-17 92.4 77 67.5
Nitab4.5_0004982g0050 Nicotiana tabacum HOM05D001166 ORTHO05D000992 7.9e-17 90.5 73 67.1
CSS0018593 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 1.0e-16 90.1 74 67.6
CAN.G253.2 Capsicum annuum HOM05D001166 ORTHO05D000992 1.3e-16 89.7 73 69.9
Rhsim01G0246500 Rhododendron simsii HOM05D001166 ORTHO05D000992 1.8e-16 89.4 74 70.3
Nitab4.5_0001348g0190 Nicotiana tabacum HOM05D001166 ORTHO05D000992 2.3e-16 89.0 73 65.8
Actinidia34521 Actinidia chinensis HOM05D001166 ORTHO05D000992 4.3e-15 84.7 74 62.2
Hma1.2p1_1756F.1_g301030 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 7.4e-15 84.0 85 56.5
Lj1A106T20 Lonicera japonica HOM05D001166 ORTHO05D000992 7.4e-15 84.0 75 64.0
Lj2A1109G68 Lonicera japonica HOM05D001166 ORTHO05D000992 3.7e-14 81.6 56 71.4
Actinidia23811 Actinidia chinensis HOM05D001166 ORTHO05D000992 6.2e-14 80.9 71 63.4
DCAR_018603 Daucus carota HOM05D001166 ORTHO05D000992 6.2e-14 80.9 76 63.2
Lsat_1_v5_gn_9_15841 Lactuca sativa HOM05D001166 ORTHO05D000992 5.3e-13 77.8 74 64.9
Cc01_g15780 Coffea canephora HOM05D001166 ORTHO05D000992 1.5e-12 76.3 86 55.8
vmacro14673 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 4.5e-12 74.7 76 63.2
ECA247G1442 Erigeron canadensis HOM05D001091 ORTHO05D001020 7.6e-12 73.9 73 65.8
Oeu058213.1 Olea europaea HOM05D001166 ORTHO05D000992 1.0e-11 73.6 81 55.6
MSTRG.18516 Avicennia marina HOM05D001166 ORTHO05D000992 1.7e-11 72.8 104 52.9
HanXRQChr11g0347341 Helianthus annuus HOM05D001166 ORTHO05D000992 1.7e-11 72.8 40 82.5
MSTRG.12734 Avicennia marina HOM05D001166 ORTHO05D000992 4.9e-11 71.2 79 50.6
SGA_v2.0_scaffold77G25325 Striga asiatica HOM05D001166 ORTHO05D000992 4.9e-11 71.2 97 46.4
Actinidia11653 Actinidia chinensis HOM05D001166 ORTHO05D000992 8.4e-11 70.5 73 63.0
Migut.D00760 Erythranthe guttata HOM05D001166 ORTHO05D000992 8.4e-11 70.5 81 51.9
Migut.N00689 Erythranthe guttata HOM05D001166 ORTHO05D000992 1.4e-10 69.7 79 58.2
Duzib138G0233 Durio zibethinus HOM05D001166 ORTHO05D000992 2.5e-10 68.9 87 52.9
Oeu064701.1 Olea europaea HOM05D001166 ORTHO05D000992 4.2e-10 68.2 80 55.0
CAN.G874.46 Capsicum annuum HOM05D001166 ORTHO05D000992 2.1e-09 65.9 66 53.0
Gohir.D11G151500 Gossypium hirsutum HOM05D001166 ORTHO05D000992 2.1e-09 65.9 87 50.6
Gorai.007G162200 Gossypium raimondii HOM05D001166 ORTHO05D000992 2.1e-09 65.9 87 50.6
Gohir.A11G145100 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.5e-09 65.1 83 49.4
BcaC01g04276 Brassica carinata HOM05D001166 ORTHO05D000992 7.9e-09 63.9 75 50.7
C03p42950 Brassica napus HOM05D001166 ORTHO05D000992 7.9e-09 63.9 75 50.7
BolC3t16563H Brassica oleracea HOM05D001166 ORTHO05D000992 7.9e-09 63.9 75 50.7
HanXRQChr08g0231271 Helianthus annuus HOM05D001166 ORTHO05D000992 7.9e-09 63.9 73 53.4
BraA03t12712Z Brassica rapa HOM05D001166 ORTHO05D000992 1.0e-08 63.5 78 51.3
Ciclev10016354m.g Citrus clementina HOM05D001166 ORTHO05D000992 1.0e-08 63.5 90 46.7
COL.COLO4_04514 Corchorus olitorius HOM05D001166 ORTHO05D000992 1.8e-08 62.8 86 51.2
Rhsim13G0055700 Rhododendron simsii HOM05D001166 ORTHO05D000992 1.8e-08 62.8 74 55.4
vmacro02846 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 3.0e-08 62.0 73 56.2
Gohir.D08G058600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.9e-08 61.6 92 44.6
Thecc.01G204900 Theobroma cacao HOM05D001166 ORTHO05D000992 3.9e-08 61.6 82 48.8
Actinidia23133 Actinidia chinensis HOM05D001166 ORTHO05D000992 5.1e-08 61.2 36 75.0
BcaB04g21286 Brassica carinata HOM05D001166 ORTHO05D000992 6.7e-08 60.8 73 49.3
SalBow6G3218 Salvia bowleyana HOM05D001166 ORTHO05D000992 1.5e-07 59.7 103 46.6
SGA_v2.0_scaffold95G28681 Striga asiatica HOM05D001166 ORTHO05D000992 1.9e-07 59.3 87 43.7
Cpa.g.sc8.22 Carica papaya HOM05D001166 ORTHO05D000992 2.5e-07 58.9 83 48.2
TWI18G0984 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 2.5e-07 58.9 84 51.2
ECA248G1315 Erigeron canadensis HOM05D001166 ORTHO05D000992 3.3e-07 58.5 69 53.6
Gohir.A07G162100 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.3e-07 58.5 81 53.1
Gohir.D07G168600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.3e-07 58.5 81 53.1
Gorai.004G060500 Gossypium raimondii HOM05D001166 ORTHO05D000992 3.3e-07 58.5 92 42.4
Gorai.N001000 Gossypium raimondii HOM05D001166 ORTHO05D000992 3.3e-07 58.5 81 53.1
unitig_52.g17417 Utricularia gibba HOM05D001166 ORTHO05D000992 5.7e-07 57.8 65 49.2
Nn1g09565 Nelumbo nucifera HOM05D001166 ORTHO05D000992 7.4e-07 57.4 73 46.6
SalBow2G2393 Salvia bowleyana HOM05D001166 ORTHO05D000992 9.6e-07 57.0 78 51.3
TWI36G0272 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 9.6e-07 57.0 80 52.5
TWI36G0628 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 9.6e-07 57.0 80 52.5
Atru.chr6.3487 Acer truncatum HOM05D001166 ORTHO05D000992 1.6e-06 56.2 86 47.7
C05p59750 Brassica napus HOM05D001166 ORTHO05D000992 1.6e-06 56.2 80 53.8
Manes.13G057700 Manihot esculenta HOM05D001166 ORTHO05D000992 1.6e-06 56.2 94 42.6
AL3G18910 Arabidopsis lyrata HOM05D001166 ORTHO05D000992 2.8e-06 55.5 78 48.7
CARHR082250 Cardamine hirsuta HOM05D001166 ORTHO05D000992 2.8e-06 55.5 83 43.4
Duzib211G0070 Durio zibethinus HOM05D001166 ORTHO05D000992 3.7e-06 55.1 87 46.0
BolC1t05545H Brassica oleracea HOM05D001166 ORTHO05D000992 6.2e-06 54.3 75 45.3
BolC5t34629H Brassica oleracea HOM05D001166 ORTHO05D000992 8.2e-06 53.9 80 52.5
THA.LOC104819022 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 8.2e-06 53.9 31 74.2


User provided reference genes

Program Settings