Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 0.0e+00 1186.0 591 100.0
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 3.3e-296 1021.1 603 87.2
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.2e-293 1012.7 598 83.8
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 1.1e-291 1006.1 597 85.4
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.3e-228 796.6 611 67.1
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 8.5e-228 793.9 615 65.4
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 2.5e-227 792.3 614 66.0
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 2.3e-225 785.8 599 66.3
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 1.5e-219 766.5 597 68.2
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 7.2e-219 764.2 612 64.4
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 1.4e-217 760.0 617 64.3
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 9.8e-216 753.8 622 63.2
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 8.6e-212 740.7 429 86.7
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.5e-208 729.9 597 63.7
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 7.5e-208 727.6 576 64.4
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 3.7e-207 725.3 633 61.5
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 3.2e-206 722.2 598 62.2
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 5.4e-206 721.5 597 62.1
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 7.0e-206 721.1 612 62.4
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 7.0e-206 721.1 598 62.0
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 1.6e-205 719.9 611 61.5
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 2.0e-205 719.5 597 63.8
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.5e-205 718.8 543 68.1
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 7.8e-205 717.6 590 64.1
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 2.3e-204 716.1 595 62.0
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 2.9e-204 715.7 614 60.4
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 6.6e-204 714.5 611 61.9
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 2.8e-202 709.1 603 62.0
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 1.8e-201 706.4 607 61.1
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 2.3e-201 706.1 600 59.7
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 6.8e-201 704.5 586 61.6
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.5e-200 703.4 576 63.4
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 1.5e-200 703.4 617 60.8
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 9.8e-200 700.7 599 61.9
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.7e-199 699.9 581 62.8
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.4e-199 698.0 581 62.7
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.4e-199 698.0 577 62.7
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.9e-198 696.4 626 59.7
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 7.0e-198 694.5 612 59.3
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 7.0e-198 694.5 639 57.0
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 9.2e-198 694.1 586 61.9
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 3.0e-196 689.1 589 62.3
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 1.5e-195 686.8 614 59.6
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 4.3e-195 685.3 590 60.8
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 5.6e-195 684.9 612 58.3
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 7.3e-195 684.5 608 58.2
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 7.3e-195 684.5 528 67.2
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 2.3e-193 679.5 616 59.3
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 6.8e-193 677.9 618 58.6
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.0e-192 676.4 598 60.4
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 2.2e-191 672.9 603 58.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 2.2e-191 672.9 514 66.5
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 1.1e-190 670.6 597 58.3
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-190 669.8 570 61.6
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 1.2e-189 667.2 589 57.4
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 2.7e-189 666.0 499 69.3
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 2.7e-189 666.0 595 59.2
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 2.7e-189 666.0 498 67.9
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.7e-188 663.3 574 60.3
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 3.0e-188 662.5 593 57.3
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 3.9e-188 662.1 616 57.6
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.9e-188 662.1 594 58.4
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 6.6e-188 661.4 613 56.4
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.5e-187 660.2 594 58.2
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.9e-187 659.8 594 58.4
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.3e-187 659.1 476 71.4
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 5.6e-187 658.3 606 58.9
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 1.6e-186 656.8 591 57.9
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.2e-184 650.6 574 59.1
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.5e-184 650.2 596 58.2
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 3.4e-184 649.0 591 58.9
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 2.9e-183 646.0 601 57.4
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 2.9e-183 646.0 600 58.2
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 6.4e-183 644.8 594 57.9
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 3.5e-181 639.0 584 57.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.9e-179 633.3 600 56.5
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 1.4e-177 627.1 594 56.1
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 4.0e-177 625.5 591 55.8
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 6.8e-177 624.8 655 51.3
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 6.8e-177 624.8 561 59.7
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 8.9e-177 624.4 611 56.1
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 2.4e-174 616.3 577 56.2
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.8e-169 600.1 595 55.5
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 2.4e-169 599.7 517 60.5
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 1.4e-166 590.5 606 51.0
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 2.1e-165 586.6 506 60.9
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 3.5e-165 585.9 493 62.1
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 3.3e-163 579.3 461 61.0
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-161 574.3 475 59.6
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 7.6e-160 568.2 605 53.9
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 1.3e-159 567.4 603 53.4
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 1.9e-158 563.5 566 50.4
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 5.5e-150 535.4 483 57.8
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 6.0e-149 531.9 500 57.0
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 1.5e-144 517.3 449 59.2
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 2.3e-140 503.4 352 69.3
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 6.7e-140 501.9 407 60.7
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 8.8e-132 474.9 612 43.3
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 1.1e-126 458.0 577 43.7
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 2.5e-126 456.8 546 46.3
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 3.2e-126 456.4 339 68.4
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 3.9e-124 449.5 591 45.9
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 2.0e-112 410.6 367 58.9
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 3.5e-104 383.3 281 70.1
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 9.2e-97 358.6 474 42.2
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 1.0e-95 355.1 386 47.4
CANSAT21G2443 Cannabis sativa HOM05D002465 ORTHO05D005308 7.3e-94 349.0 314 60.8
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 1.8e-92 344.4 291 58.4
MSTRG.8701 Avicennia marina HOM05D002465 ORTHO05D005308 1.5e-75 288.1 239 66.1
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 2.2e-74 284.3 338 45.3
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 1.8e-68 264.6 181 66.3
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 6.4e-66 256.1 213 59.2
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 2.1e-61 241.1 155 68.4
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.7e-61 240.0 163 69.3
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.7e-61 240.0 163 69.3
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.7e-61 240.0 163 69.3
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.7e-61 240.0 163 69.3
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 8.1e-61 239.2 390 37.4
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 1.2e-59 235.3 190 65.8
CSS0047166 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 2.6e-59 234.2 214 59.8
MD01G1209700 Malus domestica HOM05D002465 ORTHO05D005308 4.3e-54 216.9 246 54.1
Zm00001eb320240 Zea mays HOM05D002465 ORTHO05D005308 2.4e-52 211.1 221 52.5
HPP92_028543 Vanilla planifolia HOM05D002465 ORTHO05D005308 4.5e-43 180.3 160 55.6
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.2e-42 177.9 241 49.4
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 2.5e-38 164.5 116 62.1
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 1.7e-34 151.8 446 29.1
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.9e-33 148.3 218 40.8
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.0e-32 143.3 161 47.8
vmacro06620 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 1.8e-31 141.7 139 52.5
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 8.7e-31 139.4 363 27.8
SEGI_28877 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 2.1e-29 134.8 126 49.2
Psat0s1616g0040 Pisum sativum HOM05D002465 ORTHO05D005308 8.5e-26 122.9 138 54.3
RcHm_v2.0_Chr1g0361031 Rosa chinensis HOM05D002465 ORTHO05D005308 1.1e-25 122.5 68 79.4
Solyc12g044350.1 Solanum lycopersicum HOM05D002465 ORTHO05D005308 4.6e-24 117.1 69 88.4
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 4.8e-21 107.1 174 36.8
Sabra17G0121500 Salix brachista HOM05D002465 ORTHO05D005308 9.1e-20 102.8 135 43.0
Rhsim10G0052100 Rhododendron simsii HOM05D002465 ORTHO05D036401 1.5e-19 102.1 161 49.1
Nitab4.5_0007593g0030 Nicotiana tabacum HOM05D002465 ORTHO05D005308 1.1e-17 95.9 45 95.6
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 2.5e-17 94.7 160 35.6
Sabra18G0007300 Salix brachista HOM05D002718 ORTHO05D003269 9.4e-17 92.8 77 72.7
CBR_g19350 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-15 87.0 150 34.7
PSO063G0346 Papaver somniferum HOM05D002465 ORTHO05D005308 6.7e-15 86.7 111 41.4
Peaxi162Scf00023g00818 Petunia axillaris HOM05D002465 ORTHO05D005308 2.6e-14 84.7 73 63.0
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 3.8e-10 70.9 72 45.8
MBI04_g15062_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 3.9e-07 60.8 159 34.0
CBR_g47978 Chara braunii HOM05D002465 ORTHO05D005308 2.0e-06 58.5 100 31.0
FAN01G2746 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.7e-06 57.0 54 51.9


User provided reference genes

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