Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.1e-130 469.9 230 100.0
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 5.8e-124 447.6 234 94.9
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 3.7e-110 401.7 241 84.2
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 1.0e-107 393.7 238 82.8
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 5.0e-107 391.3 236 83.1
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 9.4e-106 387.1 240 80.8
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.6e-97 359.8 191 89.5
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 4.7e-81 305.1 198 74.7
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 8.0e-81 304.3 200 75.5
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 2.3e-80 302.8 195 75.9
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 5.2e-80 301.6 174 82.2
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 1.5e-79 300.1 196 73.5
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 2.6e-79 299.3 153 88.9
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 4.4e-79 298.5 170 80.6
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 5.7e-79 298.1 182 76.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 2.2e-78 296.2 182 76.9
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 4.8e-78 295.0 168 83.9
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 4.8e-78 295.0 198 73.2
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.1e-77 293.9 160 85.6
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.4e-77 293.5 194 73.2
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.8e-77 293.1 190 75.8
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 2.4e-77 292.7 159 86.2
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 2.4e-77 292.7 159 86.2
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 3.1e-77 292.4 177 79.1
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 3.1e-77 292.4 157 85.4
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 5.3e-77 291.6 193 72.0
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 5.3e-77 291.6 157 84.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.6e-76 290.0 154 87.0
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 2.0e-76 289.7 195 71.3
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 2.0e-76 289.7 191 73.3
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 2.7e-76 289.3 161 83.9
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 3.5e-76 288.9 172 76.2
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.5e-76 288.9 193 72.5
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 4.5e-76 288.5 174 79.3
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 5.9e-76 288.1 154 84.4
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 5.9e-76 288.1 153 83.7
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 2.9e-75 285.8 168 81.5
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 3.8e-75 285.4 154 82.5
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 5.0e-75 285.0 192 70.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 5.0e-75 285.0 190 73.2
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 6.5e-75 284.6 153 86.9
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 6.5e-75 284.6 190 72.6
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 6.5e-75 284.6 154 82.5
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 8.5e-75 284.3 160 82.5
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 8.5e-75 284.3 160 82.5
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 8.5e-75 284.3 154 85.7
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.1e-74 283.9 190 72.6
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 1.1e-74 283.9 168 80.4
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.5e-74 283.5 172 78.5
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 1.9e-74 283.1 188 72.9
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.9e-74 283.1 177 76.8
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 1.9e-74 283.1 155 83.9
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.5e-74 282.7 190 72.6
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 3.2e-74 282.3 152 84.9
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 3.2e-74 282.3 174 77.6
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 4.2e-74 282.0 173 74.6
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.2e-74 282.0 190 73.2
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 5.5e-74 281.6 156 83.3
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 7.2e-74 281.2 199 71.4
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 7.2e-74 281.2 175 77.7
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 7.2e-74 281.2 161 80.1
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 9.4e-74 280.8 172 79.1
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 2.1e-73 279.6 150 87.3
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 2.7e-73 279.3 161 82.6
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.6e-73 278.9 145 85.5
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 4.7e-73 278.5 198 71.7
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 6.1e-73 278.1 181 74.6
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 8.0e-73 277.7 151 85.4
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.0e-72 277.3 150 84.0
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 1.0e-72 277.3 186 70.4
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 5.2e-72 275.0 155 80.6
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.5e-71 273.5 195 70.3
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.0e-71 273.1 229 60.3
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 2.0e-71 273.1 192 70.3
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 4.4e-71 271.9 175 72.0
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 5.7e-71 271.6 158 78.5
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 5.7e-71 271.6 169 76.9
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.3e-70 270.4 173 74.0
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 2.2e-70 269.6 154 81.2
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 4.8e-70 268.5 170 71.2
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.1e-69 267.3 192 66.7
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 1.1e-69 267.3 176 70.5
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 1.8e-69 266.5 155 78.7
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 1.8e-69 266.5 155 78.7
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 1.8e-69 266.5 155 78.7
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 2.4e-69 266.2 155 78.1
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 3.1e-69 265.8 186 69.9
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 3.1e-69 265.8 186 69.9
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 4.1e-69 265.4 206 66.5
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 4.1e-69 265.4 141 83.7
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.6e-68 263.5 143 81.1
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 1.0e-67 260.8 161 78.3
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.3e-62 243.8 130 83.8
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 2.4e-61 239.6 166 69.9
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 2.0e-60 236.5 155 72.3
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.7e-60 236.1 143 74.1
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 3.3e-58 229.2 144 75.0
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 9.5e-58 227.6 192 60.9
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 1.6e-52 210.3 117 82.1
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 1.1e-50 204.1 143 62.2
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.3e-48 196.4 136 67.6
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.3e-46 188.0 190 54.2
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.6e-44 183.7 131 65.6
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 2.7e-44 183.0 92 91.3
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 3.6e-33 146.0 161 51.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.9e-30 136.3 100 62.0
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 2.1e-25 120.2 168 39.9
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.0e-19 101.3 124 46.0
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 7.6e-15 85.1 42 90.5
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.0e-06 58.2 29 89.7


User provided reference genes

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