Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 2.4e-87 325.5 167 100.0
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 5.8e-73 277.7 167 88.0
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 6.7e-45 184.5 184 65.8
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 8.2e-43 177.6 181 64.1
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 4.1e-42 175.3 181 63.5
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 6.5e-40 167.9 188 60.6
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.4e-23 113.6 196 47.4
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 2.5e-23 112.8 185 45.4
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 2.5e-23 112.8 195 46.7
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 2.1e-22 109.8 199 45.2
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 6.7e-21 104.8 187 46.5
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 8.8e-21 104.4 205 42.4
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 1.1e-20 104.0 168 47.0
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 4.4e-20 102.1 173 46.2
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 7.4e-20 101.3 190 44.2
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 1.7e-19 100.1 190 44.7
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 1.7e-19 100.1 190 43.7
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 1.7e-19 100.1 190 44.7
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 2.2e-19 99.8 195 40.5
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 2.8e-19 99.4 190 42.6
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 2.8e-19 99.4 183 40.4
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 2.8e-19 99.4 183 40.4
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 2.8e-19 99.4 202 44.6
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 2.8e-19 99.4 186 47.8
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 8.2e-19 97.8 190 43.7
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 8.2e-19 97.8 190 43.7
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 8.2e-19 97.8 185 41.6
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 8.2e-19 97.8 192 43.2
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 1.1e-18 97.4 172 46.5
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 1.1e-18 97.4 190 42.6
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 1.4e-18 97.1 183 42.6
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.4e-18 97.1 183 47.0
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 1.8e-18 96.7 184 41.3
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 1.8e-18 96.7 184 41.8
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.4e-18 96.3 186 44.6
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 2.4e-18 96.3 195 42.1
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 2.4e-18 96.3 165 40.6
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 4.1e-18 95.5 186 44.6
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 7.0e-18 94.7 192 42.7
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 7.0e-18 94.7 168 40.5
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.2e-17 94.0 200 42.5
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.2e-17 94.0 200 42.5
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-17 93.6 177 40.1
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.6e-17 92.8 170 41.2
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 2.6e-17 92.8 163 45.4
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 4.5e-17 92.0 179 42.5
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 4.5e-17 92.0 185 40.5
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 4.5e-17 92.0 185 40.5
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 4.5e-17 92.0 190 38.9
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 4.5e-17 92.0 185 40.5
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 5.9e-17 91.7 187 41.2
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 5.9e-17 91.7 187 41.2
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 5.9e-17 91.7 187 41.2
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 5.9e-17 91.7 195 42.6
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 7.7e-17 91.3 179 40.8
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 1.0e-16 90.9 176 43.2
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.0e-16 90.9 198 40.4
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 1.3e-16 90.5 186 41.9
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 1.3e-16 90.5 199 41.7
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 2.2e-16 89.7 187 41.2
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 2.9e-16 89.4 192 41.7
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 6.5e-16 88.2 184 41.8
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 6.5e-16 88.2 184 41.8
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 6.5e-16 88.2 200 39.5
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 8.5e-16 87.8 177 41.2
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 1.1e-15 87.4 207 39.6
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 1.5e-15 87.0 180 41.1
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 1.5e-15 87.0 193 42.0
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 1.9e-15 86.7 202 41.1
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 1.9e-15 86.7 194 38.1
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.9e-15 86.7 151 44.4
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 1.9e-15 86.7 154 44.2
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.9e-15 86.7 182 39.6
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 3.2e-15 85.9 186 42.5
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 3.2e-15 85.9 182 40.7
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 4.2e-15 85.5 202 41.6
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 9.4e-15 84.3 177 39.5
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 9.4e-15 84.3 182 39.0
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 9.4e-15 84.3 177 39.5
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.2e-14 84.0 185 36.2
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 1.2e-14 84.0 182 38.5
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 1.2e-14 84.0 182 38.5
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.2e-14 84.0 180 42.2
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.2e-14 84.0 186 40.9
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.6e-14 83.6 142 43.0
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 2.1e-14 83.2 171 42.7
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 2.1e-14 83.2 204 38.2
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 2.7e-14 82.8 177 40.1
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 2.7e-14 82.8 177 40.1
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 3.6e-14 82.4 187 40.1
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 3.6e-14 82.4 123 48.0
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 3.6e-14 82.4 179 44.1
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 4.7e-14 82.0 192 37.5
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 6.1e-14 81.6 162 42.6
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.4e-13 80.5 190 38.9
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 1.4e-13 80.5 151 43.0
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.8e-13 80.1 86 52.3
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.8e-13 80.1 176 36.9
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 1.8e-13 80.1 181 39.2
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 1.8e-13 80.1 151 42.4
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 1.8e-13 80.1 188 41.5
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 4.0e-13 79.0 185 37.3
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 5.2e-13 78.6 183 41.5
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 8.8e-13 77.8 78 56.4
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.5e-12 77.0 148 39.9
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 1.5e-12 77.0 192 38.5
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.5e-12 77.0 185 37.3
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 2.0e-12 76.6 78 57.7
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 2.0e-12 76.6 162 37.7
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 2.6e-12 76.3 112 49.1
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 2.6e-12 76.3 187 39.0
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 3.3e-12 75.9 195 37.4
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 4.4e-12 75.5 186 34.9
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 4.4e-12 75.5 194 37.6
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 4.4e-12 75.5 185 36.8
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 4.4e-12 75.5 194 38.7
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 5.7e-12 75.1 188 37.8
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 5.7e-12 75.1 169 37.9
Sc04g0008280 Simmondsia chinensis HOM05D005097 ORTHO05D006186 7.5e-12 74.7 162 43.2
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 9.7e-12 74.3 193 37.8
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.7e-11 73.6 173 37.6
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 1.7e-11 73.6 188 41.0
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 1.7e-11 73.6 82 53.7
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 1.7e-11 73.6 100 52.0
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 2.2e-11 73.2 196 34.7
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.8e-11 72.8 99 51.5
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 2.8e-11 72.8 186 40.3
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 3.7e-11 72.4 107 49.5
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 3.7e-11 72.4 167 38.3
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 3.7e-11 72.4 197 33.5
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 4.8e-11 72.0 75 58.7
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 4.8e-11 72.0 72 54.2
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 4.8e-11 72.0 177 41.2
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.1e-10 70.9 174 34.5
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 5.3e-10 68.6 165 37.6
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 7.0e-10 68.2 133 39.8
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 9.1e-10 67.8 73 54.8
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 3.5e-09 65.9 175 36.0
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 3.8e-08 62.4 167 37.1
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 6.5e-08 61.6 187 36.4
unitig_747.g21176 Utricularia gibba HOM05D005097 ORTHO05D006186 1.9e-07 60.1 164 38.4
BcaC08g45865 Brassica carinata HOM05D005097 ORTHO05D006186 4.2e-07 58.9 136 40.4


User provided reference genes

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