Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007543g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-30 136.0 69 100.0
Nitab4.5_0001165g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-24 114.8 64 90.6
Nitab4.5_0002352g0100 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-24 114.8 64 90.6
Nitab4.5_0001774g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-23 112.5 64 87.5
Nitab4.5_0010159g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-23 112.5 65 86.2
Nitab4.5_0000665g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-22 107.8 64 84.4
Nitab4.5_0014758g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-21 105.5 64 84.4
Nitab4.5_0007535g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.6e-21 104.4 57 89.5
Nitab4.5_0013629g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-20 102.4 54 94.4
Nitab4.5_0015811g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.0e-20 100.9 54 92.6
Nitab4.5_0005334g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.9e-20 100.1 54 92.6
Nitab4.5_0004394g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.9e-20 99.8 58 84.5
Nitab4.5_0010859g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.0e-19 98.6 54 92.6
Nitab4.5_0012693g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.6e-19 98.2 65 70.8
Nitab4.5_0011312g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.4e-19 97.8 54 90.7
Nitab4.5_0000023g0250 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.6e-19 96.7 65 70.8
Nitab4.5_0003207g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.6e-19 96.7 54 88.9
Nitab4.5_0000006g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-18 95.9 65 69.2
Nitab4.5_0000087g0200 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-18 95.9 65 70.8
Nitab4.5_0001877g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-18 95.9 65 70.8
Nitab4.5_0005994g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-18 95.9 65 69.2
Nitab4.5_0010914g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-18 95.5 65 69.2
Nitab4.5_0012783g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-18 95.5 64 70.3
Nitab4.5_0000605g0190 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-18 95.1 65 69.2
Nitab4.5_0003533g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-18 95.1 53 88.7
Nitab4.5_0003979g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-18 95.1 65 69.2
Nitab4.5_0001094g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.9e-18 94.7 54 88.9
Nitab4.5_0005665g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.9e-18 94.7 65 69.2
Nitab4.5_0004477g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-18 94.0 65 69.2
Nitab4.5_0000093g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.4e-18 93.6 65 67.7
Nitab4.5_0001785g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.4e-18 93.2 65 67.7
Nitab4.5_0003091g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-17 92.8 65 67.7
Nitab4.5_0005587g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-17 92.8 65 66.2
Nitab4.5_0000427g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-17 92.4 60 73.3
Nitab4.5_0001510g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-17 92.4 54 87.0
Nitab4.5_0003379g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-17 92.4 63 68.3
Nitab4.5_0001619g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.9e-17 92.0 65 66.2
Nitab4.5_0002147g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.9e-17 92.0 65 67.7
Nitab4.5_0001620g0080 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-17 91.7 65 66.2
Nitab4.5_0002031g0150 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-17 91.7 65 66.2
Nitab4.5_0004456g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-17 91.7 65 67.7
Nitab4.5_0011858g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-17 91.7 65 69.2
Nitab4.5_0004347g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.2e-17 91.3 63 69.8
Nitab4.5_0012615g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.2e-17 91.3 54 85.2
Nitab4.5_0004446g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-17 89.7 65 66.2
Nitab4.5_0005039g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-17 89.7 65 66.2
Nitab4.5_0005694g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-17 89.7 65 64.6
Nitab4.5_0006110g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-17 89.7 65 66.2
Nitab4.5_0001560g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-16 89.4 65 66.2
Nitab4.5_0002622g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-16 89.4 65 64.6
Nitab4.5_0007494g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-16 89.4 64 65.6
Nitab4.5_0001663g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-16 89.0 54 83.3
Nitab4.5_0003542g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-16 89.0 55 76.4
Nitab4.5_0004249g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-16 89.0 45 93.3
Nitab4.5_0025670g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-16 89.0 64 65.6
Nitab4.5_0001726g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-16 88.6 48 91.7
Nitab4.5_0019913g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-16 88.6 65 66.2
Nitab4.5_0003519g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.7e-16 88.2 65 64.6
Nitab4.5_0002149g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.5e-16 87.8 60 66.7
Nitab4.5_0008448g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.6e-16 87.4 63 66.7
Nitab4.5_0011768g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.6e-16 87.4 60 75.0
Nitab4.5_0003208g0100 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.8e-16 86.7 54 81.5
Nitab4.5_0003146g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.0e-15 86.3 50 84.0
Nitab4.5_0001202g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-15 85.9 55 70.9
Nitab4.5_0007280g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-15 85.9 45 91.1
Nitab4.5_0001510g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-15 85.5 44 93.2
Nitab4.5_0002975g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-15 85.5 54 81.5
Nitab4.5_0004848g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-15 85.5 55 74.5
Nitab4.5_0028309g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-15 85.5 58 69.0
Nitab4.5_0010344g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-15 84.3 55 70.9
Nitab4.5_0013894g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-15 84.3 55 70.9
Nitab4.5_0002065g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-15 84.0 55 72.7
Nitab4.5_0004597g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.1e-15 84.0 55 70.9
Nitab4.5_0002492g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-15 83.2 60 66.7
Nitab4.5_0007252g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-15 83.2 55 69.1
Nitab4.5_0016452g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.7e-15 83.2 44 90.9
Nitab4.5_0006220g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-14 82.8 44 88.6
Nitab4.5_0011907g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-14 82.8 55 70.9
Nitab4.5_0002612g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-14 82.4 60 63.3
Nitab4.5_0004708g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-14 82.4 47 85.1
Nitab4.5_0001431g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-14 81.6 55 67.3
Nitab4.5_0002169g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.5e-14 81.6 44 86.4
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-14 81.3 55 69.1
Nitab4.5_0004029g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.3e-14 81.3 44 88.6
Nitab4.5_0002106g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-14 80.9 60 66.7
Nitab4.5_0008208g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.3e-14 80.9 44 86.4
Nitab4.5_0006429g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.6e-14 80.5 55 67.3
Nitab4.5_0007497g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.6e-14 80.5 58 63.8
Nitab4.5_0000039g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.3e-14 80.1 44 88.6
Nitab4.5_0004880g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.3e-14 80.1 60 65.0
Nitab4.5_0007503g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.3e-14 80.1 48 87.5
Nitab4.5_0003592g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-14 79.7 44 86.4
Nitab4.5_0006796g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-14 79.7 55 67.3
Nitab4.5_0007025g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-14 79.7 45 91.1
Nitab4.5_0000596g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-13 79.3 61 60.7
Nitab4.5_0003114g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.3e-13 79.3 43 88.4
Nitab4.5_0002031g0140 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-13 79.0 65 64.6
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-13 79.0 55 65.5
Nitab4.5_0000020g0120 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-13 78.6 44 88.6
Nitab4.5_0003700g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-13 78.6 45 86.7
Nitab4.5_0004948g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.1e-13 78.6 56 66.1
Nitab4.5_0003101g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.8e-13 78.2 52 67.3
Nitab4.5_0007350g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.8e-13 78.2 54 66.7
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.8e-13 78.2 55 65.5
Nitab4.5_0007845g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.8e-13 77.4 55 67.3
Nitab4.5_0011116g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-12 76.3 52 65.4
Nitab4.5_0001555g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-12 75.9 55 67.3
Nitab4.5_0006800g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-12 74.7 54 75.9
Nitab4.5_0000929g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.0e-11 72.0 65 60.0
CAN.G637.69 Capsicum annuum HOM05D000365 ORTHO05D001422 3.4e-11 71.2 64 53.1
Nitab4.5_0004811g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.6e-11 70.1 64 60.9
Nitab4.5_0010052g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.8e-10 67.8 50 66.0
Nitab4.5_0008613g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-10 67.4 47 68.1
CAN.G574.11 Capsicum annuum HOM05D000265 ORTHO05D001422 1.1e-09 66.2 50 60.0
Nitab4.5_0002523g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.1e-09 66.2 32 96.9
Nitab4.5_0011745g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.4e-09 63.9 32 93.8
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 7.1e-09 63.5 54 55.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 9.3e-09 63.2 55 54.5
Nitab4.5_0005506g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-08 62.8 32 87.5
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 1.2e-08 62.8 55 54.5
Nitab4.5_0004146g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-08 62.4 65 55.4
Nitab4.5_0000780g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.5e-08 61.2 32 90.6
Nitab4.5_0003146g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-08 60.1 32 84.4
Nitab4.5_0004459g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.9e-08 60.1 33 84.8
Sopen03g009290 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-07 59.3 55 50.9
CAN.G449.13 Capsicum annuum HOM05D002016 ORTHO05D001422 1.8e-07 58.9 65 44.6
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-07 58.5 44 61.4
Nitab4.5_0018015g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-07 57.8 54 51.9
Solyc04g025755.1 Solanum lycopersicum HOM05D002047 ORTHO05D001422 1.1e-06 56.2 56 42.9
Nitab4.5_0008334g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.5e-06 55.8 32 87.5
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-06 55.1 55 47.3
Sopen09g024660 Solanum pennellii HOM05D002047 ORTHO05D001422 2.5e-06 55.1 56 42.9
Nitab4.5_0000318g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 4.3e-06 54.3 58 44.8
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 4.3e-06 54.3 46 54.3
Nitab4.5_0004906g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.6e-06 53.9 44 54.5
Nitab4.5_0007488g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.6e-06 53.9 54 57.4
Nitab4.5_0003256g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-06 53.5 39 66.7
Nitab4.5_0005383g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-06 53.5 31 71.0
Nitab4.5_0005572g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-06 53.5 27 92.6
Nitab4.5_0006358g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.4e-06 53.5 33 69.7
Sopen01g024730 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-06 53.5 58 43.1
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-06 53.5 61 44.3
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-06 53.5 61 44.3
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 7.4e-06 53.5 61 44.3
CAN.G352.84 Capsicum annuum HOM05D000160 ORTHO05D000496 9.6e-06 53.1 47 55.3
Nitab4.5_0011602g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.6e-06 53.1 45 62.2


User provided reference genes

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