Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007530g0050 Nicotiana tabacum HOM05D006716 ORTHO05D008396 3.5e-49 198.0 99 100.0
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 5.9e-33 144.1 77 93.5
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 1.7e-24 115.9 74 74.3
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 1.7e-24 115.9 74 74.3
Solyc02g082600.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 3.9e-24 114.8 74 71.6
Sopen02g027300 Solanum pennellii HOM05D006716 ORTHO05D008396 2.8e-22 108.6 74 70.3
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-19 99.4 77 61.0
Nitab4.5_0001187g0060 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.2e-19 99.0 73 67.1
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 2.2e-19 99.0 78 60.3
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 8.3e-19 97.1 65 70.8
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 2.4e-18 95.5 74 60.8
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 4.1e-18 94.7 72 62.5
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 6.0e-17 90.9 74 64.9
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 1.0e-16 90.1 68 63.2
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 2.5e-15 85.5 61 65.6
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 3.3e-15 85.1 63 61.9
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 1.2e-14 83.2 68 58.8
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-14 82.8 69 56.5
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.8e-14 82.0 77 57.1
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.4e-12 75.1 75 50.7
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 7.5e-12 73.9 75 50.7
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 6.4e-11 70.9 65 49.2
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 4.1e-10 68.2 74 47.3
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 1.2e-09 66.6 74 45.9
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.6e-09 66.2 80 41.2
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.6e-09 66.2 80 41.2
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.5e-09 65.1 90 42.2
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 7.8e-09 63.9 74 43.2
DCAR_001167 Daucus carota HOM05D006716 ORTHO05D008396 7.8e-09 63.9 71 43.7
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 1.0e-08 63.5 75 42.7
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.7e-08 62.8 70 50.0
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-08 62.8 74 45.9
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 2.3e-08 62.4 74 44.6
vmacro15745 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.3e-08 62.4 74 50.0
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 3.9e-08 61.6 74 43.2
vmacro15748 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 8.6e-08 60.5 73 45.2
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.5e-07 59.7 72 43.1
Ah.10g035330 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.5e-07 58.9 73 50.7
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 3.3e-07 58.5 75 44.0
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 3.3e-07 58.5 75 44.0
Lj6A58T50 Lonicera japonica HOM05D006716 ORTHO05D008396 1.2e-06 56.6 68 45.6
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 2.8e-06 55.5 70 42.9
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 3.6e-06 55.1 76 43.4
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 8.1e-06 53.9 73 46.6
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 8.1e-06 53.9 65 40.0


User provided reference genes

Program Settings