Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.9e-161 572.4 282 100.0
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 8.7e-122 440.7 270 80.0
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.1e-121 440.3 270 80.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 5.7e-121 438.0 267 79.4
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.3e-112 410.2 225 83.6
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 2.8e-112 409.1 266 75.2
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 3.7e-112 408.7 252 77.8
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 9.1e-111 404.1 226 81.4
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.0e-110 402.9 252 77.4
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 3.4e-110 402.1 224 84.4
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.0e-109 400.6 250 74.4
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.0e-109 400.6 238 78.2
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.0e-109 400.6 263 74.1
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.7e-109 399.8 200 89.5
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.2e-109 399.4 227 81.1
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.9e-109 399.1 222 82.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.1e-108 397.1 257 74.7
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.5e-108 394.8 225 79.1
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 7.2e-108 394.4 238 76.9
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-107 393.7 263 71.1
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.6e-107 393.3 251 75.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.6e-107 392.1 253 74.3
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 3.6e-107 392.1 258 72.9
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 6.1e-107 391.3 269 70.3
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 7.9e-107 391.0 238 76.9
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 7.9e-107 391.0 225 77.8
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 2.3e-106 389.4 262 71.4
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.3e-106 389.4 200 88.0
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.9e-106 388.7 255 73.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 5.1e-106 388.3 253 75.1
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 6.7e-106 387.9 226 78.3
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 6.7e-106 387.9 270 70.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 8.8e-106 387.5 200 86.0
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.1e-105 387.1 253 73.5
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 2.0e-105 386.3 247 74.9
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 3.3e-105 385.6 252 73.8
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.3e-105 385.6 257 71.6
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 4.4e-105 385.2 200 86.5
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.4e-105 385.2 254 73.2
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 4.4e-105 385.2 227 78.4
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.4e-105 384.4 236 75.0
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 9.7e-105 384.0 251 72.9
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 9.7e-105 384.0 274 70.8
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.3e-104 383.6 225 78.2
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.7e-104 383.3 249 74.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.8e-104 382.5 246 72.4
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.7e-104 382.1 239 75.3
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.7e-104 382.1 239 75.3
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.4e-103 380.2 192 88.0
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.1e-103 379.0 233 75.5
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 5.3e-103 378.3 198 83.8
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.5e-102 376.7 193 85.5
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-102 376.3 276 68.1
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.5e-102 375.6 200 84.0
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.3e-101 373.6 229 76.9
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.3e-101 373.6 228 76.3
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.2e-101 372.9 249 71.5
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.2e-101 372.9 263 69.2
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 5.0e-101 371.7 194 84.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 6.5e-101 371.3 223 76.2
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 6.5e-101 371.3 229 76.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.1e-100 370.5 264 69.7
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.9e-100 369.8 243 71.2
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.9e-100 369.8 243 71.2
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.9e-100 369.8 201 83.1
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 3.2e-100 369.0 235 72.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 5.5e-100 368.2 200 81.5
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 9.4e-100 367.5 226 73.9
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 9.4e-100 367.5 247 70.9
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.6e-99 366.7 267 66.3
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.6e-99 365.5 189 85.7
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 4.7e-99 365.2 253 68.0
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 4.7e-99 365.2 248 70.2
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.7e-99 365.2 189 85.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 4.7e-99 365.2 277 63.9
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.0e-98 364.0 189 86.2
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.0e-98 364.0 263 68.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.8e-98 363.2 237 74.7
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 3.0e-98 362.5 229 75.1
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 4.0e-98 362.1 262 66.4
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 6.7e-98 361.3 247 69.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 8.8e-98 360.9 200 79.5
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 3.3e-97 359.0 207 80.2
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 7.4e-97 357.8 246 69.1
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 8.2e-96 354.4 272 63.6
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.2e-94 350.5 190 83.2
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 2.0e-94 349.7 192 80.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.0e-93 347.4 352 53.7
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 3.2e-92 342.4 188 80.9
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.0e-90 337.4 212 72.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.2e-88 329.7 229 72.1
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.8e-87 326.6 236 66.1
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.5e-84 315.1 188 73.9
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 8.0e-83 311.2 188 72.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.8e-82 310.1 188 72.9
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.2e-81 307.4 266 58.6
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.2e-81 307.4 157 86.6
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.4e-81 305.8 196 69.4
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 5.9e-78 295.0 184 70.7
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.0e-74 284.3 196 69.4
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.4e-63 247.3 192 65.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.0e-61 239.6 183 57.4
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 6.8e-58 228.4 192 52.6
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 6.8e-58 228.4 120 84.2
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.4e-57 226.1 186 58.1
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.1e-55 218.4 126 73.8
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 7.8e-54 214.9 193 49.7
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-53 214.2 193 49.2
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 3.7e-48 196.1 134 70.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 7.1e-47 191.8 199 52.3
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 7.3e-44 181.8 180 46.7
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 2.6e-41 173.3 168 52.4
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 3.9e-29 132.9 97 67.0
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 2.8e-11 73.6 74 55.4
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.0e-08 65.1 84 42.9
Cfa005891 Carpinus fangiana HOM05D000363 ORTHO05D000236 6.5e-08 62.4 142 29.6
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 8.4e-08 62.0 101 34.7
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 8.4e-08 62.0 107 35.5
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 1.4e-07 61.2 122 34.4
Ca_18522_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.2e-07 60.1 122 33.6
Ca_29900_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 3.2e-07 60.1 122 33.6
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 3.2e-07 60.1 122 32.8
Haze_06505 Corylus avellana HOM05D000363 ORTHO05D000236 4.2e-07 59.7 147 29.9
AUR62008686 Chenopodium quinoa HOM05D000363 ORTHO05D000236 1.6e-06 57.8 103 29.1
Lsat_1_v5_gn_3_75041 Lactuca sativa HOM05D000363 ORTHO05D000236 2.7e-06 57.0 112 31.2
MBI17_g03752_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D000236 3.5e-06 56.6 101 33.7
Sopen02g023420 Solanum pennellii HOM05D000363 ORTHO05D000236 3.5e-06 56.6 110 33.6
CANSAT11G2375 Cannabis sativa HOM05D000363 ORTHO05D000236 4.6e-06 56.2 126 31.0
Solyc02g078570.3 Solanum lycopersicum HOM05D000363 ORTHO05D000236 4.6e-06 56.2 110 33.6
EL10Ac7g17538 Beta vulgaris HOM05D000363 ORTHO05D000236 6.1e-06 55.8 71 31.0
FvH4_3g04781 Fragaria vesca HOM05D000363 ORTHO05D000236 6.1e-06 55.8 101 32.7
FAN21G0435 Fragaria x ananassa HOM05D000363 ORTHO05D000236 6.1e-06 55.8 101 32.7
FAN25G3617 Fragaria x ananassa HOM05D000363 ORTHO05D000236 6.1e-06 55.8 101 32.7
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 6.1e-06 55.8 98 38.8
CsaV3_4G000910 Cucumis sativus L. HOM05D000363 ORTHO05D000236 7.9e-06 55.5 105 32.4


User provided reference genes

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