Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007480g0060 Nicotiana tabacum HOM05D011234 ORTHO05D003195 4.1e-159 564.7 288 100.0
Nitab4.5_0002543g0100 Nicotiana tabacum HOM05D011234 ORTHO05D003195 9.6e-92 340.9 288 68.8
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 2.0e-73 280.0 292 58.6
Solyc10g050220.2 Solanum lycopersicum HOM05D011234 ORTHO05D003195 2.0e-68 263.5 296 56.1
Sopen10g021380 Solanum pennellii HOM05D011234 ORTHO05D003195 2.8e-67 259.6 280 57.1
Peaxi162Scf00003g02336 Petunia axillaris HOM05D011234 ORTHO05D003195 3.6e-46 189.5 219 52.1
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 4.4e-44 182.6 285 43.5
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 7.7e-41 171.8 308 41.2
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 7.7e-41 171.8 306 40.8
PGSC0003DMG401025788 Solanum tuberosum HOM05D011234 ORTHO05D003195 2.5e-39 166.8 307 41.0
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 4.6e-25 119.4 281 34.9
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 3.2e-18 96.7 278 32.7
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 3.9e-16 89.7 260 34.2
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.6e-14 84.3 280 31.1
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 8.1e-14 82.0 268 32.5
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 5.8e-12 75.9 271 31.4
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 1.1e-10 71.6 131 42.0
Migut.B00353 Erythranthe guttata HOM05D011234 ORTHO05D003195 3.2e-10 70.1 264 30.7
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.2e-10 70.1 285 30.2
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 7.1e-10 68.9 277 29.6
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.2e-09 68.2 241 29.9
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 3.5e-09 66.6 261 26.8
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.6e-09 66.2 280 30.7
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 4.6e-09 66.2 267 28.5
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 7.8e-09 65.5 283 29.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.3e-08 64.7 114 42.1
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 1.7e-08 64.3 226 29.6
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 2.3e-08 63.9 157 37.6
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 5.1e-08 62.8 273 30.0
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 5.1e-08 62.8 283 28.3
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 8.6e-08 62.0 283 29.0
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 4.3e-07 59.7 125 39.2
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 5.6e-07 59.3 122 36.1
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 5.6e-07 59.3 227 28.2
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 7.3e-07 58.9 266 30.1
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 7.3e-07 58.9 123 39.0
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 7.3e-07 58.9 264 27.3
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 1.6e-06 57.8 305 26.9
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 2.1e-06 57.4 269 29.7
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.1e-06 57.4 265 30.6
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 2.1e-06 57.4 258 26.4
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 3.6e-06 56.6 252 27.8
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 4.7e-06 56.2 219 27.4
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 4.7e-06 56.2 224 26.8
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 4.7e-06 56.2 269 29.4
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.7e-06 56.2 127 40.2
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 8.1e-06 55.5 137 35.0
Lalb_Chr09g0328351 Lupinus albus HOM05D003792 ORTHO05D003195 8.1e-06 55.5 246 25.6
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 8.1e-06 55.5 228 28.1
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 8.1e-06 55.5 74 41.9


User provided reference genes

Program Settings