Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.4e-110 402.9 190 100.0
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.3e-96 355.1 206 85.4
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 6.2e-63 244.6 201 62.2
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.8e-62 243.0 208 61.1
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 2.2e-60 236.1 208 61.1
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.1e-59 233.8 215 58.1
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.2e-58 230.3 209 59.3
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 1.6e-58 229.9 216 56.5
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 3.5e-58 228.8 207 58.5
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.5e-56 223.4 204 62.7
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 9.6e-56 220.7 195 61.0
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 2.1e-55 219.5 195 61.5
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 2.8e-55 219.2 200 58.0
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 2.8e-55 219.2 205 57.1
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 3.6e-55 218.8 208 55.8
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 4.8e-55 218.4 182 61.0
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.4e-54 216.9 208 55.8
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.4e-54 216.1 206 55.3
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 6.9e-54 214.5 193 58.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.0e-53 213.0 206 56.3
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 3.4e-53 212.2 199 56.3
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 5.8e-53 211.5 213 54.5
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 7.6e-53 211.1 146 71.9
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 7.6e-53 211.1 146 71.9
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 9.9e-53 210.7 197 57.4
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 9.9e-53 210.7 195 56.4
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 2.9e-52 209.1 193 57.0
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 3.8e-52 208.8 168 63.7
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.1e-51 207.2 238 48.7
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.4e-51 206.1 214 54.2
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.4e-51 206.1 117 81.2
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 4.2e-51 205.3 114 79.8
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 5.4e-51 204.9 193 60.1
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.2e-50 203.8 208 53.4
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 1.6e-50 203.4 203 54.2
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.1e-50 203.0 208 55.3
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.1e-50 203.0 208 55.3
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 3.5e-50 202.2 164 64.0
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.5e-50 202.2 210 53.8
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.7e-49 199.9 185 54.6
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 3.9e-49 198.7 206 53.4
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 6.6e-49 198.0 185 54.6
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 8.7e-49 197.6 188 54.3
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 8.7e-49 197.6 169 61.5
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 8.7e-49 197.6 201 55.7
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 8.7e-49 197.6 185 56.8
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.1e-48 197.2 163 63.2
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 1.1e-48 197.2 205 51.2
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 3.3e-48 195.7 186 54.3
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 4.3e-48 195.3 170 59.4
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 5.6e-48 194.9 170 60.0
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 5.6e-48 194.9 195 56.4
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 7.3e-48 194.5 163 62.0
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 3.6e-47 192.2 163 61.3
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 3.6e-47 192.2 206 49.5
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 6.2e-47 191.4 205 53.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 8.1e-47 191.0 158 61.4
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.1e-46 190.7 163 62.6
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 1.4e-46 190.3 166 60.2
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 1.8e-46 189.9 160 60.6
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.8e-46 189.9 162 61.7
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.8e-46 189.9 198 52.5
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 1.8e-46 189.9 151 60.9
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 4.0e-46 188.7 122 73.0
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 4.0e-46 188.7 97 86.6
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 2.6e-45 186.0 101 83.2
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.4e-45 185.7 178 58.4
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 7.6e-45 184.5 122 72.1
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.3e-44 183.7 174 58.0
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 1.7e-44 183.3 131 67.2
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 2.9e-44 182.6 213 47.9
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 2.9e-44 182.6 175 57.1
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 6.4e-44 181.4 186 52.2
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 6.4e-44 181.4 208 50.0
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 8.4e-44 181.0 156 55.8
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.9e-43 179.9 142 67.6
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.9e-43 179.9 195 49.7
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 2.4e-43 179.5 114 72.8
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 3.2e-43 179.1 174 56.3
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 7.1e-43 177.9 195 51.8
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 9.3e-43 177.6 112 68.8
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 2.1e-42 176.4 147 60.5
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 3.5e-42 175.6 134 61.2
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 4.6e-42 175.3 214 47.7
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 7.9e-42 174.5 207 47.8
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 3.0e-41 172.6 154 53.2
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.9e-41 172.2 161 54.0
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.6e-39 166.8 163 52.8
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.1e-39 166.4 147 63.3
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 2.8e-39 166.0 119 62.2
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 6.2e-39 164.9 128 58.6
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 1.8e-38 163.3 114 65.8
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.4e-38 162.9 163 50.9
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 3.1e-38 162.5 174 51.1
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.3e-36 157.1 175 50.3
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 6.5e-36 154.8 80 87.5
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.6e-34 150.2 106 62.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 6.0e-34 148.3 136 53.7
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 6.0e-34 148.3 132 59.8
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.3e-33 146.4 107 62.6
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.0e-29 133.3 123 52.8
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 2.5e-27 126.3 107 50.5
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 5.5e-27 125.2 210 41.9
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.2e-26 124.0 99 58.6
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 2.1e-26 123.2 87 62.1
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 7.9e-26 121.3 127 53.5
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.9e-24 116.7 99 53.5
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 9.7e-24 114.4 166 43.4
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 3.2e-19 99.4 135 46.7
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.2e-19 99.0 73 65.8
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 9.4e-19 97.8 73 60.3
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 1.5e-16 90.5 142 40.8
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 6.3e-15 85.1 127 46.5
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 3.8e-12 75.9 100 45.0
Cre07.g339200 Chlamydomonas reinhardtii HOM05D007022 ORTHO05D008868 1.3e-07 60.8 64 42.2


User provided reference genes

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