Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007474g0040 Nicotiana tabacum HOM05D003922 ORTHO05D004492 3.5e-73 278.1 133 100.0
Nitab4.5_0004700g0050 Nicotiana tabacum HOM05D003922 ORTHO05D004492 5.5e-50 201.1 134 81.3
PGSC0003DMG400016330 Solanum tuberosum HOM05D003922 ORTHO05D004492 5.5e-42 174.5 133 66.9
Sopen06g018570 Solanum pennellii HOM05D003922 ORTHO05D004492 7.2e-42 174.1 133 66.9
Peaxi162Scf00075g01329 Petunia axillaris HOM05D003922 ORTHO05D004492 1.3e-38 163.3 133 63.9
Dinv18325 Davidia involucrata HOM05D003922 ORTHO05D004492 1.1e-37 160.2 133 63.9
CAN.G1401.2 Capsicum annuum HOM05D003922 ORTHO05D004492 5.3e-37 157.9 133 60.9
GSVIVG01035132001 Vitis vinifera HOM05D003922 ORTHO05D004492 2.0e-36 156.0 133 60.9
Oeu050329.1 Olea europaea HOM05D003922 ORTHO05D004492 2.6e-36 155.6 133 60.9
Lj6A217G7 Lonicera japonica HOM05D003922 ORTHO05D004492 1.3e-35 153.3 133 60.9
Solyc08g014300.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 3.8e-35 151.8 133 58.6
Sopen08g005210 Solanum pennellii HOM05D003922 ORTHO05D004492 3.8e-35 151.8 133 58.6
PGSC0003DMG400016054 Solanum tuberosum HOM05D003922 ORTHO05D004492 1.5e-34 149.8 133 58.6
DCAR_005455 Daucus carota HOM05D003922 ORTHO05D004492 1.9e-34 149.4 133 60.2
TAR633G0046 Trochodendron aralioides HOM05D003922 ORTHO05D004492 1.9e-34 149.4 132 58.3
Cc03_g14390 Coffea canephora HOM05D003922 ORTHO05D004492 2.5e-34 149.1 133 58.6
Eucgr.H00289 Eucalyptus grandis HOM05D003922 ORTHO05D004492 2.5e-34 149.1 133 58.6
Oeu015712.2 Olea europaea HOM05D003922 ORTHO05D004492 5.5e-34 147.9 179 48.6
Peaxi162Scf00579g00013 Petunia axillaris HOM05D003922 ORTHO05D004492 5.5e-34 147.9 131 58.8
CSS0002835 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 7.2e-34 147.5 133 57.9
CAN.G759.3 Capsicum annuum HOM05D003922 ORTHO05D004492 1.2e-33 146.7 133 57.1
Duzib151G1155 Durio zibethinus HOM05D003922 ORTHO05D004492 1.6e-33 146.4 138 53.6
Rhsim09G0008700 Rhododendron simsii HOM05D003922 ORTHO05D004492 1.6e-33 146.4 133 58.6
PGR142G3702 Punica granatum HOM05D003922 ORTHO05D004492 2.7e-33 145.6 133 57.9
CSS0038398 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 3.6e-33 145.2 133 57.1
Gohir.A09G213608 Gossypium hirsutum HOM05D003922 ORTHO05D004492 8.0e-33 144.1 133 54.9
Gohir.D09G212300 Gossypium hirsutum HOM05D003922 ORTHO05D004492 8.0e-33 144.1 133 54.9
Gorai.006G232100 Gossypium raimondii HOM05D003922 ORTHO05D004492 8.0e-33 144.1 133 54.9
Actinidia27120 Actinidia chinensis HOM05D003922 ORTHO05D004492 1.0e-32 143.7 133 57.9
Lsat_1_v5_gn_1_74581 Lactuca sativa HOM05D003922 ORTHO05D004492 1.4e-32 143.3 131 55.0
vmacro00688 Vaccinium macrocarpon HOM05D003922 ORTHO05D004492 1.4e-32 143.3 133 57.9
MSTRG.24564 Avicennia marina HOM05D003922 ORTHO05D004492 2.3e-32 142.5 133 55.6
Manes.05G137000 Manihot esculenta HOM05D003922 ORTHO05D004492 2.3e-32 142.5 133 56.4
CSS0049854 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 3.0e-32 142.1 133 57.1
Potri.013G127400 Populus trichocarpa HOM05D003922 ORTHO05D004492 3.0e-32 142.1 132 56.1
HanXRQChr11g0343091 Helianthus annuus HOM05D003922 ORTHO05D004492 5.2e-32 141.4 132 53.8
Sabra13G0106500 Salix brachista HOM05D003922 ORTHO05D004492 6.8e-32 141.0 132 55.3
Thecc.04G164400 Theobroma cacao HOM05D003922 ORTHO05D004492 8.8e-32 140.6 130 54.6
TWI63G0384 Tripterygium wilfordii HOM05D003922 ORTHO05D004492 8.8e-32 140.6 133 55.6
SGA_v2.0_scaffold25G11004 Striga asiatica HOM05D003922 ORTHO05D004492 2.0e-31 139.4 133 54.9
BcaC07g42112 Brassica carinata HOM05D003922 ORTHO05D004492 2.6e-31 139.0 133 52.6
MSTRG.22037 Avicennia marina HOM05D003922 ORTHO05D004492 3.4e-31 138.7 133 55.6
Duzib268G1060 Durio zibethinus HOM05D003922 ORTHO05D004492 3.4e-31 138.7 133 53.4
Migut.N03060 Erythranthe guttata HOM05D003922 ORTHO05D004492 4.4e-31 138.3 133 51.9
Thhalv10009017m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 4.4e-31 138.3 133 52.6
Lj6A207G21 Lonicera japonica HOM05D003922 ORTHO05D004492 4.4e-31 138.3 125 60.0
MBI07_g11491_MAGBIO Magnolia biondii HOM05D003922 ORTHO05D004492 5.7e-31 137.9 132 53.8
Sp1g04550 Schrenkiella parvula HOM05D003922 ORTHO05D004492 5.7e-31 137.9 133 52.6
AT1G05730 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 7.5e-31 137.5 130 53.8
A09p67310 Brassica napus HOM05D003922 ORTHO05D004492 7.5e-31 137.5 133 51.9
BraA09t42062Z Brassica rapa HOM05D003922 ORTHO05D004492 7.5e-31 137.5 133 51.9
Aa31LG5G5270 Aethionema arabicum HOM05D003922 ORTHO05D004492 9.7e-31 137.1 133 51.1
Sc19g0002260 Simmondsia chinensis HOM05D003922 ORTHO05D004492 9.7e-31 137.1 130 53.8
THA.LOC104800922 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 9.7e-31 137.1 133 52.6
AL1G15640 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 1.3e-30 136.7 130 53.8
Cpa.g.sc9.377 Carica papaya HOM05D003922 ORTHO05D004492 1.3e-30 136.7 133 51.9
Nn2g13969 Nelumbo nucifera HOM05D003922 ORTHO05D004492 2.2e-30 136.0 133 52.6
SGA_v2.0_scaffold19G08849 Striga asiatica HOM05D003922 ORTHO05D004492 2.2e-30 136.0 144 51.4
Aqoxy2G04156 Aquilegia oxysepala HOM05D003922 ORTHO05D004492 3.7e-30 135.2 134 53.0
DCAR_027517 Daucus carota HOM05D003922 ORTHO05D004492 3.7e-30 135.2 132 52.3
ClCG11G013550 Citrullus lanatus HOM05D003922 ORTHO05D004492 4.8e-30 134.8 133 54.1
BolC8t52690H Brassica oleracea HOM05D003922 ORTHO05D004492 6.3e-30 134.4 132 50.8
Lj3P164T1 Lonicera japonica HOM05D003922 ORTHO05D004492 6.3e-30 134.4 131 52.7
Lju359P1T4 Lonicera japonica HOM05D003922 ORTHO05D004492 6.3e-30 134.4 131 52.7
Ciclev10022699m.g Citrus clementina HOM05D003922 ORTHO05D004492 8.3e-30 134.0 133 54.9
CsaV3_5G030170 Cucumis sativus L. HOM05D003922 ORTHO05D004492 8.3e-30 134.0 133 54.1
Sed0023559 Sechium edule HOM05D003922 ORTHO05D004492 8.3e-30 134.0 133 52.6
BcaC07g42114 Brassica carinata HOM05D003922 ORTHO05D004492 1.1e-29 133.7 134 51.5
Thhalv10017374m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 1.1e-29 133.7 133 50.4
THA.LOC104815872 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 1.1e-29 133.7 133 51.1
AT2G31725 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 1.4e-29 133.3 133 49.6
MELO3C011855.2 Cucumis melo HOM05D003922 ORTHO05D004492 1.4e-29 133.3 133 53.4
Sp4g14200 Schrenkiella parvula HOM05D003922 ORTHO05D004492 1.4e-29 133.3 133 50.4
AL4G26980 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 1.8e-29 132.9 133 49.6
EL10Ac3g06102 Beta vulgaris HOM05D003922 ORTHO05D004492 1.8e-29 132.9 132 51.5
CARHR005250 Cardamine hirsuta HOM05D003922 ORTHO05D004492 1.8e-29 132.9 132 50.8
Os11g0256200 Oryza sativa ssp. japonica HOM05D003922 ORTHO05D004492 1.8e-29 132.9 131 51.9
Cfa015673 Carpinus fangiana HOM05D003922 ORTHO05D004492 3.1e-29 132.1 133 54.1
QL10p056544 Quercus lobata HOM05D003922 ORTHO05D004492 3.1e-29 132.1 132 53.0
SalBow6G3114 Salvia bowleyana HOM05D003922 ORTHO05D004492 3.1e-29 132.1 132 53.8
ECA248G0756 Erigeron canadensis HOM05D003922 ORTHO05D004492 5.3e-29 131.3 131 49.6
RcHm_v2.0_Chr4g0405841 Rosa chinensis HOM05D003922 ORTHO05D004492 7.0e-29 131.0 133 51.9
C08p51620 Brassica napus HOM05D003922 ORTHO05D004492 9.1e-29 130.6 133 50.4
FvH4_3g34590 Fragaria vesca HOM05D003922 ORTHO05D004492 1.2e-28 130.2 133 51.9
FAN02G1921 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.2e-28 130.2 133 51.9
FAN06G3125 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.2e-28 130.2 133 51.9
FAN11G1624 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.2e-28 130.2 133 51.9
FAN25G1394 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.2e-28 130.2 133 51.9
Glyma.06G319900 Glycine max HOM05D003922 ORTHO05D004492 1.2e-28 130.2 132 51.5
Hund03208 Selenicereus undatus HOM05D003922 ORTHO05D004492 1.2e-28 130.2 132 50.0
ATR0743G180 Amborella trichopoda HOM05D003922 ORTHO05D004492 1.6e-28 129.8 130 53.1
BcaC02g11282 Brassica carinata HOM05D003922 ORTHO05D004492 1.6e-28 129.8 133 48.9
C04p18050 Brassica napus HOM05D003922 ORTHO05D004492 1.6e-28 129.8 133 48.9
BolC4t23353H Brassica oleracea HOM05D003922 ORTHO05D004492 1.6e-28 129.8 133 48.9
BcaB02g10413 Brassica carinata HOM05D003922 ORTHO05D004492 2.0e-28 129.4 133 48.9
BraA05t20315Z Brassica rapa HOM05D003922 ORTHO05D004492 2.0e-28 129.4 133 48.9
CANSAT56G1338 Cannabis sativa HOM05D003922 ORTHO05D004492 2.7e-28 129.0 133 51.1
Carub.0004s1303 Capsella rubella HOM05D003922 ORTHO05D004492 2.7e-28 129.0 132 48.5
COL.COLO4_38113 Corchorus olitorius HOM05D003922 ORTHO05D004492 2.7e-28 129.0 133 51.1
FAN21G3935 Fragaria x ananassa HOM05D003922 ORTHO05D004492 2.7e-28 129.0 133 51.1
Glyma.02G058200 Glycine max HOM05D003922 ORTHO05D004492 2.7e-28 129.0 132 51.5
FAN16G1833 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.5e-28 128.6 133 51.1
Atru.chr4.1453 Acer truncatum HOM05D003922 ORTHO05D004492 4.5e-28 128.3 133 51.1
PSO017G0931 Papaver somniferum HOM05D003922 ORTHO05D004492 4.5e-28 128.3 131 49.6
Phvul.005G007000 Phaseolus vulgaris HOM05D003922 ORTHO05D004492 4.5e-28 128.3 132 52.3
A05p13780 Brassica napus HOM05D003922 ORTHO05D004492 5.9e-28 127.9 133 48.9
Carub.0001s0508 Capsella rubella HOM05D003922 ORTHO05D004492 5.9e-28 127.9 130 51.5
CARHR125410 Cardamine hirsuta HOM05D003922 ORTHO05D004492 7.7e-28 127.5 132 47.7
Zm00001eb169120 Zea mays HOM05D003922 ORTHO05D004492 7.7e-28 127.5 131 48.9
unitig_578.g16270 Utricularia gibba HOM05D003922 ORTHO05D004492 1.0e-27 127.1 125 50.4
MD04G1037100 Malus domestica HOM05D003922 ORTHO05D004492 1.7e-27 126.3 133 50.4
PSO573G0028 Papaver somniferum HOM05D003922 ORTHO05D004492 1.7e-27 126.3 131 48.9
Glyma.04G117900 Glycine max HOM05D003922 ORTHO05D004492 5.0e-27 124.8 132 49.2
Ca_14117_v3 Cicer arietinum L. HOM05D003922 ORTHO05D004492 1.1e-26 123.6 132 50.8
CiPaw.01G168800 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.9e-26 122.9 133 49.6
AUR62002412 Chenopodium quinoa HOM05D003922 ORTHO05D004492 1.9e-26 122.9 132 48.5
VMungo1080G1004 Vigna mungo HOM05D003922 ORTHO05D004492 1.9e-26 122.9 132 48.5
THA.LOC104804105 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 3.2e-26 122.1 133 48.1
Sp4g25790 Schrenkiella parvula HOM05D003922 ORTHO05D004492 4.2e-26 121.7 130 48.5
Zm00001eb169100 Zea mays HOM05D003922 ORTHO05D004492 4.2e-26 121.7 131 48.9
AT2G43720 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 5.5e-26 121.3 133 47.4
Lj3g0023756 Lotus japonicus HOM05D003922 ORTHO05D004492 1.2e-25 120.2 130 50.0
CARHR138910 Cardamine hirsuta HOM05D003922 ORTHO05D004492 2.1e-25 119.4 133 45.9
CDE09G1276 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 2.1e-25 119.4 130 49.2
Aa31LG1G25440 Aethionema arabicum HOM05D003922 ORTHO05D004492 4.7e-25 118.2 130 48.5
TPR.G16707 Trifolium pratense HOM05D003922 ORTHO05D004492 4.7e-25 118.2 132 47.7
Lalb_Chr18g0048821 Lupinus albus HOM05D003922 ORTHO05D004492 6.1e-25 117.9 132 47.7
Prupe.1G185700 Prunus persica HOM05D003922 ORTHO05D004492 6.1e-25 117.9 132 47.7
AL4G42550 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 8.0e-25 117.5 133 45.1
Thhalv10001669m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 8.0e-25 117.5 130 46.9
BcaC02g07156 Brassica carinata HOM05D000941 ORTHO05D004492 1.4e-24 116.7 133 45.1
BolC4t28571H Brassica oleracea HOM05D003922 ORTHO05D004492 1.4e-24 116.7 133 45.1
CiPaw.02G099200 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.4e-24 116.7 133 47.4
Medtr3g009130 Medicago truncatula HOM05D003922 ORTHO05D004492 2.3e-24 115.9 130 46.2
Psat5g230680 Pisum sativum HOM05D003922 ORTHO05D004492 2.3e-24 115.9 132 47.7
A04p33020 Brassica napus HOM05D003922 ORTHO05D004492 3.0e-24 115.5 133 44.4
C04p70710 Brassica napus HOM05D003922 ORTHO05D004492 3.0e-24 115.5 133 44.4
BraA04t18761Z Brassica rapa HOM05D003922 ORTHO05D004492 3.0e-24 115.5 133 44.4
BcaB06g29344 Brassica carinata HOM05D003922 ORTHO05D004492 4.0e-24 115.2 130 46.2
BcaC07g42117 Brassica carinata HOM05D003922 ORTHO05D004492 5.2e-24 114.8 133 46.6
arahy.Tifrunner.gnm1.ann1.D9AT9V Arachis hypogaea HOM05D003922 ORTHO05D004492 1.2e-23 113.6 132 45.5
HPP92_023724 Vanilla planifolia HOM05D003922 ORTHO05D004492 2.2e-22 109.4 131 45.0
Carub.0004s2626 Capsella rubella HOM05D003922 ORTHO05D004492 8.3e-22 107.5 133 42.9
Solyc06g053490.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 1.0e-16 90.5 46 87.0
Glyma.06G288100 Glycine max HOM05D003922 ORTHO05D004492 8.9e-16 87.4 110 47.3
Glyma.06G288300 Glycine max HOM05D003922 ORTHO05D004492 8.9e-16 87.4 110 47.3
Lsat_1_v5_gn_3_36701 Lactuca sativa HOM05D003922 ORTHO05D004492 8.9e-16 87.4 113 43.4
Glyma.06G320000 Glycine max HOM05D003922 ORTHO05D004492 1.5e-15 86.7 130 37.7
Carub.0001s0509 Capsella rubella HOM05D003922 ORTHO05D004492 5.7e-15 84.7 109 41.3
Glyma.06G288000 Glycine max HOM05D003922 ORTHO05D004492 1.1e-13 80.5 130 34.6
arahy.Tifrunner.gnm1.ann1.1Q5EFH Arachis hypogaea HOM05D003922 ORTHO05D004492 1.4e-13 80.1 132 36.4
CDE04G0234 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 4.1e-13 78.6 47 72.3
Nitab4.5_0000013g0490 Nicotiana tabacum HOM05D003922 ORTHO05D004492 4.1e-13 78.6 47 74.5
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea HOM05D003922 ORTHO05D004492 2.0e-12 76.3 132 35.6
Haze_00850 Corylus avellana HOM05D003922 ORTHO05D004492 2.9e-11 72.4 60 56.7
SMO174G0129 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 2.9e-11 72.4 130 28.5
arahy.Tifrunner.gnm1.ann1.V6LTI0 Arachis hypogaea HOM05D003922 ORTHO05D004492 3.9e-11 72.0 93 43.0
BcaB05g24674 Brassica carinata HOM05D001689 ORTHO05D004492 2.5e-10 69.3 47 61.7
Haze_00864 Corylus avellana HOM05D003922 ORTHO05D004492 2.5e-10 69.3 50 62.0
SMO174G0123 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 3.3e-10 68.9 130 26.9
SEGI_40113 Sequoiadendron giganteum HOM05D003922 ORTHO05D004492 4.3e-10 68.6 50 54.0
arahy.Tifrunner.gnm1.ann1.GG9VXM Arachis hypogaea HOM05D003922 ORTHO05D004492 9.5e-10 67.4 60 53.3
Pp3c22_16840 Physcomitrium patens HOM05D003922 ORTHO05D004492 9.5e-10 67.4 124 32.3
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 2.8e-09 65.9 44 61.4
CiPaw.16G066500 Carya illinoinensis HOM05D003922 ORTHO05D004492 6.1e-09 64.7 55 58.2
SMO116G0121 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 8.0e-09 64.3 130 26.2
BcaB05g25136 Brassica carinata HOM05D003922 ORTHO05D004492 4.4e-07 58.5 44 56.8
Glyma.06G288200 Glycine max HOM05D003922 ORTHO05D004492 5.8e-07 58.2 125 28.8
arahy.Tifrunner.gnm1.ann1.DMY77W Arachis hypogaea HOM05D003922 ORTHO05D004492 1.3e-06 57.0 44 52.3


User provided reference genes

Program Settings