Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.2e-105 386.3 179 100.0
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 3.7e-49 198.7 192 54.7
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.7e-44 182.6 193 50.3
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.4e-43 180.3 183 51.9
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.2e-39 167.2 182 48.4
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 5.0e-38 161.8 189 48.1
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.6e-34 149.4 153 54.2
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.0e-30 137.5 123 56.1
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 4.2e-29 132.1 190 39.5
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.8e-27 126.7 187 39.0
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 6.7e-27 124.8 189 39.7
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 8.8e-27 124.4 189 39.2
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 2.6e-26 122.9 176 40.3
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 3.3e-26 122.5 190 38.4
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 2.6e-23 112.8 173 38.2
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 3.8e-22 109.0 176 35.8
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 1.4e-19 100.5 133 46.6
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 4.5e-15 85.5 136 35.3
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 6.1e-12 75.1 138 32.6
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 8.0e-12 74.7 160 33.1
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 3.0e-11 72.8 137 33.6
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 3.0e-11 72.8 119 35.3
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 3.0e-11 72.8 119 35.3
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 4.0e-11 72.4 135 34.1
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.0e-11 72.4 125 38.4
Nitab4.5_0000053g0200 Nicotiana tabacum HOM05D000007 ORTHO05D007252 6.8e-11 71.6 89 48.3
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-10 70.9 125 37.6
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-10 70.1 118 37.3
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 3.4e-10 69.3 138 31.9
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-10 68.9 94 40.4
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.4e-10 68.9 94 40.4
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 7.5e-10 68.2 136 33.8
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.2e-09 66.6 121 34.7
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.2e-09 66.6 123 35.8
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.8e-09 66.2 121 36.4
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.9e-09 65.5 121 37.2
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 4.9e-09 65.5 141 34.0
Peaxi162Scf00324g00083 Petunia axillaris HOM05D013374 ORTHO05D013933 2.4e-08 63.2 176 30.1
COL.COLO4_36676 Corchorus olitorius HOM05D000007 ORTHO05D007252 3.1e-08 62.8 179 26.8
Nitab4.5_0004546g0030 Nicotiana tabacum HOM05D017051 ORTHO05D020904 4.1e-08 62.4 126 30.2
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 5.4e-08 62.0 140 32.1
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 7.0e-08 61.6 139 28.8
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 7.0e-08 61.6 143 28.7
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.0e-08 61.6 139 33.1
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 9.1e-08 61.2 123 31.7
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 1.6e-07 60.5 136 32.4
Oeu026989.1 Olea europaea HOM05D000007 ORTHO05D007252 4.5e-07 58.9 137 32.8
TAR302G0003 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.5e-07 58.9 76 43.4
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.9e-07 58.5 111 36.0
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 1.3e-06 57.4 135 31.1
Oeu002086.1 Olea europaea HOM05D000007 ORTHO05D007252 1.7e-06 57.0 122 33.6
Potri.013G093100 Populus trichocarpa HOM05D000007 ORTHO05D007252 1.7e-06 57.0 122 32.0
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 2.3e-06 56.6 76 42.1
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 2.9e-06 56.2 135 31.9
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.9e-06 56.2 111 35.1
Oeu039143.1 Olea europaea HOM05D000007 ORTHO05D007252 3.8e-06 55.8 122 31.1
Oeu051380.1 Olea europaea HOM05D000007 ORTHO05D007252 5.0e-06 55.5 132 31.8
Sc16g0011260 Simmondsia chinensis HOM05D038559 ORTHO05D007252 5.0e-06 55.5 157 28.0
PGSC0003DMG400021626 Solanum tuberosum HOM05D009844 ORTHO05D007252 5.0e-06 55.5 140 28.6
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 6.6e-06 55.1 123 30.1
Nitab4.5_0000762g0130 Nicotiana tabacum HOM05D013374 ORTHO05D013933 8.6e-06 54.7 124 31.5
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.6e-06 54.7 110 37.3


User provided reference genes

Program Settings