Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.2e-82 308.9 157 100.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.5e-75 284.6 157 94.3
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-67 260.0 157 89.2
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-62 243.4 159 83.0
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.1e-62 243.4 158 84.2
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 5.7e-62 241.1 158 83.5
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.1e-61 239.2 159 82.4
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 6.9e-60 234.2 158 81.6
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 6.5e-58 227.6 148 82.4
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 3.9e-55 218.4 162 75.3
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.3e-53 213.4 156 72.4
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 2.8e-53 212.2 159 74.8
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 3.7e-53 211.8 159 74.8
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 3.7e-53 211.8 159 74.8
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 8.2e-53 210.7 157 73.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.4e-52 209.9 157 74.5
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 4.1e-52 208.4 157 72.6
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 6.9e-52 207.6 159 69.8
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 9.1e-52 207.2 158 75.3
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 9.1e-52 207.2 122 88.5
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.2e-51 206.8 160 71.9
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.5e-51 206.5 160 73.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 2.0e-51 206.1 140 79.3
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 2.0e-51 206.1 160 71.9
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.6e-51 205.7 137 81.0
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 2.6e-51 205.7 137 81.0
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 3.4e-51 205.3 165 70.3
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 140 79.3
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 3.4e-51 205.3 154 71.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.9e-51 204.5 148 75.7
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.0e-50 203.8 159 69.2
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.0e-50 203.8 120 87.5
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.0e-50 203.8 118 88.1
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.3e-50 203.4 155 73.5
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 1.3e-50 203.4 118 87.3
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.3e-50 203.4 118 89.0
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 1.3e-50 203.4 123 87.8
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.7e-50 203.0 118 88.1
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.2e-50 202.6 163 69.9
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.2e-50 202.6 163 69.9
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 161 70.2
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 2.2e-50 202.6 118 89.0
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.2e-50 202.6 159 71.1
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.2e-50 202.6 158 70.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.2e-50 202.6 134 79.9
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.9e-50 202.2 120 85.0
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.8e-50 201.8 118 85.6
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.0e-50 201.4 116 88.8
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 6.5e-50 201.1 153 71.2
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 6.5e-50 201.1 158 70.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 6.5e-50 201.1 155 72.3
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.5e-50 201.1 123 84.6
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 8.5e-50 200.7 118 89.0
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 8.5e-50 200.7 159 69.8
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 8.5e-50 200.7 158 69.6
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 8.5e-50 200.7 157 72.0
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 158 69.0
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.1e-49 200.3 118 87.3
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.1e-49 200.3 165 71.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.4e-49 199.9 117 88.9
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.9e-49 199.5 163 69.9
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 2.5e-49 199.1 159 70.4
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.5e-49 199.1 159 69.2
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 4.2e-49 198.4 159 69.2
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 4.2e-49 198.4 159 69.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 4.2e-49 198.4 118 88.1
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 4.2e-49 198.4 116 88.8
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.2e-49 198.4 160 70.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 5.5e-49 198.0 150 74.0
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 7.2e-49 197.6 151 73.5
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 9.4e-49 197.2 157 72.0
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.1e-48 196.1 157 68.8
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.7e-48 195.7 118 86.4
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 3.6e-48 195.3 120 84.2
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 7.9e-48 194.1 118 86.4
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.0e-47 193.7 163 67.5
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 3.9e-47 191.8 123 80.5
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.9e-47 191.8 146 71.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 3.9e-47 191.8 118 85.6
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.1e-47 191.4 160 67.5
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 6.7e-47 191.0 160 67.5
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 8.8e-47 190.7 167 65.3
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.1e-46 190.3 119 84.9
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.5e-46 189.9 117 84.6
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.0e-46 189.5 120 84.2
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.7e-46 188.0 118 83.9
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 5.7e-46 188.0 118 83.9
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.8e-45 185.7 116 86.2
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 8.2e-45 184.1 117 82.1
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 8.5e-42 174.1 117 75.2
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.5e-38 163.3 120 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.7e-37 159.8 160 58.1
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 4.1e-36 155.2 130 68.5
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 3.5e-35 152.1 94 85.1
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.0e-34 150.6 124 68.5
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.3e-34 150.2 93 82.8
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.2e-34 149.4 104 71.2
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 5.0e-34 148.3 91 83.5
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.0e-34 148.3 94 81.9
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.1e-33 147.1 112 72.3
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.5e-33 146.0 129 62.8
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.1e-32 142.9 123 65.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 3.0e-31 139.0 88 81.8
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.2e-30 137.1 134 59.0
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.0e-30 136.3 90 78.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 3.3e-30 135.6 89 77.5
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.1e-28 130.6 122 60.7
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.1e-28 130.6 114 64.0
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.8e-15 86.7 65 73.8
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.7e-13 80.1 91 46.2
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.3e-09 65.9 106 38.7
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 2.0e-06 56.6 107 36.4


User provided reference genes

Program Settings