Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-67 259.6 128 100.0
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.1e-66 256.5 128 97.7
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.5e-65 252.7 128 96.9
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 6.9e-58 227.3 121 89.3
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.5e-57 226.1 121 88.4
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.5e-57 226.1 121 88.4
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 3.4e-57 224.9 124 87.1
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 6.5e-56 220.7 123 87.0
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 1.2e-46 189.9 124 71.8
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.0e-45 185.3 122 75.4
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.3e-43 179.9 121 71.1
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.8e-43 178.7 122 73.8
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.1e-42 176.8 122 72.1
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.1e-42 175.3 121 67.8
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 4.1e-42 174.9 122 71.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 5.3e-42 174.5 122 70.5
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 5.3e-42 174.5 122 72.1
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 9.0e-42 173.7 123 69.1
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.6e-41 172.2 122 70.5
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.6e-41 172.2 122 71.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 2.6e-41 172.2 117 69.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-40 169.9 122 71.3
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.3e-40 169.9 122 70.5
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 2.2e-40 169.1 122 67.2
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 2.9e-40 168.7 124 67.7
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 8.5e-40 167.2 117 70.9
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.1e-39 166.8 120 69.2
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.1e-39 166.8 122 67.2
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.4e-39 166.4 122 66.4
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.9e-39 166.0 122 68.9
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.9e-39 166.0 114 67.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 3.2e-39 165.2 122 67.2
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 4.2e-39 164.9 114 69.3
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 5.5e-39 164.5 122 68.9
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 5.5e-39 164.5 123 68.3
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.6e-38 162.9 120 66.7
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.6e-38 162.9 113 71.7
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 2.7e-38 162.2 123 66.7
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 2.7e-38 162.2 122 63.1
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 3.6e-38 161.8 123 66.7
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 3.6e-38 161.8 109 69.7
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 4.6e-38 161.4 122 66.4
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.6e-38 161.4 122 67.2
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 4.6e-38 161.4 124 62.9
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 7.9e-38 160.6 122 65.6
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 7.9e-38 160.6 122 63.9
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.8e-37 159.5 122 63.9
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 2.3e-37 159.1 122 64.8
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 3.0e-37 158.7 114 66.7
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 3.0e-37 158.7 123 65.9
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 5.1e-37 157.9 116 68.1
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 5.1e-37 157.9 120 67.5
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 5.1e-37 157.9 122 61.5
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.1e-36 156.8 120 65.8
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.5e-36 156.4 121 66.1
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.5e-36 156.4 117 64.1
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 2.0e-36 156.0 114 64.0
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 2.0e-36 156.0 114 64.0
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 2.5e-36 155.6 123 64.2
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.5e-36 155.6 122 65.6
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 3.3e-36 155.2 117 67.5
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 5.7e-36 154.5 122 63.9
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 5.7e-36 154.5 117 62.4
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 5.7e-36 154.5 117 62.4
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.3e-35 153.3 122 61.5
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.3e-35 153.3 120 65.0
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.7e-35 152.9 122 59.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.7e-35 152.9 122 59.8
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.7e-35 152.9 122 64.8
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 3.7e-35 151.8 117 63.2
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 8.2e-35 150.6 117 62.4
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 8.2e-35 150.6 122 63.1
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.8e-34 149.4 118 60.2
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.1e-34 148.7 122 60.7
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 4.1e-34 148.3 122 57.4
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 4.1e-34 148.3 118 64.4
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.2e-33 146.7 117 65.0
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.2e-33 146.7 118 63.6
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.2e-33 146.7 120 60.0
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.2e-33 146.7 121 61.2
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.5e-33 146.4 120 64.2
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.5e-33 146.4 120 61.7
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 3.4e-33 145.2 128 58.6
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.9e-32 142.1 120 60.8
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 8.5e-32 140.6 97 69.1
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 8.5e-32 140.6 115 60.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 8.5e-32 140.6 126 57.9
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.9e-31 139.4 126 58.7
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 3.2e-31 138.7 122 62.3
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 7.2e-31 137.5 87 69.0
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 9.4e-31 137.1 106 64.2
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 2.1e-30 136.0 100 65.0
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 3.6e-30 135.2 120 57.5
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 3.6e-30 135.2 109 60.6
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 6.1e-30 134.4 114 55.3
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 1.4e-29 133.3 125 58.4
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 1.8e-29 132.9 112 56.2
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.3e-29 132.5 93 68.8
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 2.0e-28 129.4 96 65.6
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-25 120.2 78 67.9
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 3.8e-24 115.2 72 73.6
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.4e-21 106.7 80 66.2
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.0e-21 105.1 69 66.7
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 9.7e-20 100.5 82 54.9
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.0e-16 90.5 85 52.9
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 7.2e-15 84.3 56 67.9
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 3.4e-12 75.5 90 43.3
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 1.1e-10 70.5 54 53.7
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 1.4e-10 70.1 69 42.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 5.4e-10 68.2 80 33.8
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.3e-08 63.5 89 36.0


User provided reference genes

Program Settings