Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.7e-94 349.4 185 100.0
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 2.6e-82 308.9 187 92.0
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 1.7e-78 296.2 185 85.9
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 6.6e-78 294.3 185 85.4
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 9.6e-77 290.4 185 84.9
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 4.9e-73 278.1 191 81.7
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 8.1e-68 260.8 189 78.8
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.9e-64 249.6 185 74.1
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 7.9e-63 244.2 177 75.7
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 5.1e-62 241.5 186 74.7
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 1.4e-59 233.4 182 73.1
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 1.8e-59 233.0 187 72.2
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 9.0e-59 230.7 186 73.1
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 5.8e-58 228.0 185 72.4
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 5.8e-58 228.0 188 71.3
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 4.9e-57 224.9 180 71.7
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 2.5e-56 222.6 186 68.8
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 9.3e-56 220.7 187 68.4
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.6e-55 219.9 186 69.4
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 2.1e-55 219.5 186 68.3
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 2.1e-55 219.5 186 68.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 4.6e-55 218.4 185 66.5
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 1.3e-54 216.9 185 67.6
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 5.1e-54 214.9 185 65.9
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 5.1e-54 214.9 191 67.5
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.5e-53 213.4 187 66.8
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 2.5e-53 212.6 183 68.9
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 2.5e-53 212.6 183 68.9
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 3.3e-53 212.2 189 65.6
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 2.1e-52 209.5 235 56.6
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 6.3e-52 208.0 185 65.4
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 1.1e-51 207.2 188 64.9
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 1.4e-51 206.8 186 65.1
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.8e-51 206.5 184 64.1
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 3.1e-51 205.7 186 65.6
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 3.1e-51 205.7 182 65.4
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 4.1e-51 205.3 186 66.1
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 4.1e-51 205.3 186 64.5
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 5.3e-51 204.9 186 64.5
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 5.3e-51 204.9 186 64.0
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 6.9e-51 204.5 183 63.4
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 1.2e-50 203.8 192 63.5
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 1.5e-50 203.4 185 64.9
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 2.6e-50 202.6 188 63.8
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 3.4e-50 202.2 194 62.9
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.5e-50 201.8 186 63.4
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 5.9e-50 201.4 189 65.6
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 7.6e-50 201.1 182 64.3
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 7.6e-50 201.1 183 62.8
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.0e-49 200.7 185 64.3
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 1.3e-49 200.3 188 62.2
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 1.7e-49 199.9 187 66.3
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 2.2e-49 199.5 185 64.3
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 2.2e-49 199.5 187 63.1
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 2.9e-49 199.1 184 64.7
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.8e-49 198.7 186 62.4
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 6.5e-49 198.0 194 62.9
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 8.5e-49 197.6 184 64.1
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 1.1e-48 197.2 182 63.7
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 1.4e-48 196.8 184 63.0
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 1.4e-48 196.8 184 63.0
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 1.4e-48 196.8 187 65.8
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 2.5e-48 196.1 183 64.5
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 2.5e-48 196.1 184 64.1
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 3.2e-48 195.7 187 63.1
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 3.2e-48 195.7 186 66.7
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 4.2e-48 195.3 187 62.0
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 7.2e-48 194.5 186 63.4
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 7.2e-48 194.5 194 60.8
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 9.3e-48 194.1 182 65.9
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 9.3e-48 194.1 186 62.4
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 2.7e-47 192.6 186 62.4
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.7e-47 192.6 186 62.4
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 4.6e-47 191.8 179 63.7
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 4.6e-47 191.8 180 63.9
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 6.1e-47 191.4 190 64.7
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.0e-46 190.7 186 61.3
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.0e-46 190.7 186 61.3
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 1.8e-46 189.9 192 59.9
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 1.8e-46 189.9 182 62.1
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 2.3e-46 189.5 186 60.8
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 3.0e-46 189.1 186 60.8
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 3.9e-46 188.7 198 61.1
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 5.1e-46 188.3 186 59.7
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 8.7e-46 187.6 187 62.0
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 1.5e-45 186.8 186 59.1
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 1.9e-45 186.4 181 59.1
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 2.5e-45 186.0 184 62.0
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 4.3e-45 185.3 195 60.5
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 4.3e-45 185.3 178 62.9
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 1.8e-43 179.9 121 81.0
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 4.1e-43 178.7 189 58.7
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 1.5e-42 176.8 186 57.5
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 5.0e-41 171.8 206 55.3
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 2.7e-39 166.0 206 53.4
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 1.0e-38 164.1 142 66.2
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.1e-37 160.6 189 52.4
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.5e-37 160.2 189 52.4
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 2.2e-36 156.4 130 66.9
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 6.3e-36 154.8 134 64.2
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 4.1e-35 152.1 189 56.6
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 5.3e-35 151.8 194 53.1
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 1.2e-34 150.6 125 63.2
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 3.4e-34 149.1 197 49.2
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 2.2e-33 146.4 194 51.0
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 4.2e-32 142.1 158 55.1
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 1.2e-31 140.6 187 49.7
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 4.7e-31 138.7 157 55.4
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.3e-30 136.3 164 57.3
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 2.3e-30 136.3 130 57.7
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.1e-29 134.0 89 83.1
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 2.0e-29 133.3 161 54.7
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 2.6e-29 132.9 245 41.6
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 2.6e-29 132.9 145 59.3
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 3.3e-29 132.5 96 76.0
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 9.7e-29 131.0 94 77.7
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.8e-28 129.4 139 56.1
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.1e-27 125.6 164 48.8
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 4.1e-27 125.6 184 52.7
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 1.7e-25 120.2 141 52.5
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 3.8e-25 119.0 112 60.7
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 1.9e-24 116.7 130 54.6
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 2.5e-24 116.3 130 52.3
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 4.4e-21 105.5 96 64.6
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 2.0e-18 96.7 91 54.9
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 6.5e-17 91.7 129 50.4
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 9.8e-13 77.8 84 51.2
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.2e-12 76.6 62 75.8
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.8e-12 75.5 94 48.9
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 8.3e-12 74.7 81 56.8
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.4e-11 73.9 109 44.0
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 7.0e-11 71.6 81 54.3
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 7.0e-11 71.6 81 54.3
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 1.2e-10 70.9 140 40.7
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 2.0e-10 70.1 97 47.4
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 1.1e-08 64.3 62 59.7
Mapoly0001s0539 Marchantia polymorpha HOM05D024399 ORTHO05D023494 1.6e-07 60.5 154 35.1
CAN.G419.11 Capsicum annuum HOM05D005654 ORTHO05D006438 6.1e-07 58.5 40 85.0
Zm00001eb372850 Zea mays HOM05D005654 ORTHO05D006438 2.3e-06 56.6 56 64.3


User provided reference genes

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