Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.4e-170 602.8 300 100.0
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 3.9e-120 435.3 294 77.2
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 1.8e-117 426.4 366 62.6
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.0e-115 420.6 366 61.7
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 6.3e-110 401.4 368 60.6
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 9.4e-98 360.9 280 70.0
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 5.1e-88 328.6 303 59.7
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 6.2e-49 198.7 194 59.3
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 1.5e-42 177.6 305 39.7
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 2.5e-42 176.8 338 38.2
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.6e-41 174.1 305 39.0
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 3.6e-41 172.9 299 40.1
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 6.2e-41 172.2 311 38.3
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 8.1e-41 171.8 305 38.4
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.8e-40 170.6 295 39.7
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 4.0e-40 169.5 300 39.0
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 5.2e-40 169.1 310 39.0
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 8.9e-40 168.3 196 52.0
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.0e-39 167.2 312 39.1
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.4e-39 166.0 316 38.9
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 5.8e-39 165.6 139 62.6
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 5.8e-39 165.6 293 39.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 9.8e-39 164.9 315 38.1
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.7e-38 164.1 296 37.5
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.7e-38 162.9 322 38.2
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 1.4e-37 161.0 307 40.4
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.2e-37 159.8 310 38.1
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.2e-36 157.9 291 37.1
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 2.1e-36 157.1 266 41.0
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 6.0e-36 155.6 300 36.0
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.0e-35 154.8 299 37.8
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 1.7e-35 154.1 164 53.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 2.3e-35 153.7 281 39.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.0e-35 153.3 307 37.8
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 5.1e-35 152.5 295 38.0
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 6.6e-35 152.1 292 38.0
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 6.6e-35 152.1 306 38.6
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 1.1e-34 151.4 192 49.0
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.1e-34 151.4 320 35.3
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.9e-34 150.6 172 48.3
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 2.5e-34 150.2 297 37.4
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 4.3e-34 149.4 323 35.9
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 7.3e-34 148.7 305 37.0
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 1.6e-33 147.5 310 37.4
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 2.1e-33 147.1 242 40.5
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 2.8e-33 146.7 200 46.5
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 4.7e-33 146.0 207 47.8
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 4.7e-33 146.0 210 43.8
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 6.2e-33 145.6 305 37.0
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 8.1e-33 145.2 309 36.6
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.1e-32 144.8 309 35.3
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.1e-32 144.8 176 49.4
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.1e-32 144.8 296 34.1
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 3.1e-32 143.3 305 36.4
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.1e-32 143.3 198 47.0
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 5.2e-32 142.5 174 47.7
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 2.6e-31 140.2 302 33.8
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 4.4e-31 139.4 305 35.7
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 7.6e-31 138.7 304 36.2
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 7.6e-31 138.7 297 32.7
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 9.9e-31 138.3 291 36.8
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 2.9e-30 136.7 113 63.7
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.9e-30 136.7 318 34.3
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.1e-29 134.8 180 47.2
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 3.2e-29 133.3 297 35.4
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 5.4e-29 132.5 305 34.8
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.6e-28 131.0 298 33.2
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.7e-27 127.5 102 64.7
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 3.9e-27 126.3 178 46.6
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 6.6e-27 125.6 292 32.9
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.5e-26 124.4 136 50.7
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.5e-26 124.4 304 31.2
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 3.3e-26 123.2 287 35.2
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 4.3e-26 122.9 277 35.4
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 8.1e-25 118.6 318 34.3
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 3.1e-24 116.7 121 55.4
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 3.1e-24 116.7 142 48.6
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 3.1e-24 116.7 318 33.0
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.2e-23 114.8 297 32.7
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.5e-23 114.4 104 60.6
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.0e-23 114.0 153 45.1
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 2.0e-23 114.0 151 45.7
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 2.6e-23 113.6 138 46.4
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 5.8e-23 112.5 217 37.3
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 4.9e-22 109.4 111 54.1
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.4e-21 107.8 197 40.1
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 2.4e-21 107.1 302 31.1
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.1e-20 104.0 305 32.8
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.5e-20 103.2 315 29.5
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 2.3e-19 100.5 194 37.1
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 3.0e-19 100.1 268 35.8
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 6.6e-19 99.0 178 39.9
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.1e-17 94.0 122 48.4
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.5e-15 87.8 287 30.0
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.7e-14 84.3 115 42.6
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.2e-14 84.0 150 38.7
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.2e-12 78.2 193 30.6
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.3e-11 73.9 90 52.2
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 3.9e-11 73.2 89 51.7
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.1e-10 71.6 107 39.3


User provided reference genes

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