Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.6e-32 140.2 65 100.0
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 7.1e-27 123.2 65 89.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.5e-20 100.1 61 77.0
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.2e-19 97.8 64 73.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 4.1e-14 80.9 61 67.2
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.0e-13 78.6 69 60.9
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.7e-12 75.5 61 62.3
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 2.2e-12 75.1 61 63.9
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 2.2e-12 75.1 61 63.9
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 2.2e-12 75.1 61 63.9
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 3.8e-12 74.3 54 68.5
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 6.5e-12 73.6 61 62.3
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 3.2e-11 71.2 53 64.2
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 9.3e-11 69.7 54 66.7
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.1e-10 68.6 41 78.0
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.7e-10 68.2 64 57.8
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 3.5e-10 67.8 59 61.0
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 4.6e-10 67.4 61 59.0
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 4.6e-10 67.4 61 59.0
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 4.6e-10 67.4 61 59.0
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 6.1e-10 67.0 54 63.0
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 6.1e-10 67.0 53 64.2
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.0e-09 66.2 59 61.0
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.0e-09 66.2 51 64.7
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 1.8e-09 65.5 51 64.7
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.9e-09 64.3 37 81.1
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 6.7e-09 63.5 55 60.0
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 8.7e-09 63.2 51 62.7
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 1.1e-08 62.8 51 62.7
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.1e-08 62.8 51 60.8
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-08 62.0 63 58.7
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-08 62.0 63 58.7
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-08 62.0 63 58.7
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-08 62.0 63 58.7
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 4.3e-08 60.8 45 66.7
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 1.3e-07 59.3 51 60.8
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 1.3e-07 59.3 35 77.1
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 1.6e-07 58.9 53 54.7
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 2.8e-07 58.2 39 64.1
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 8.2e-07 56.6 41 61.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.1e-06 56.2 32 78.1
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 1.1e-06 56.2 31 77.4
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.1e-06 56.2 31 77.4
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.1e-06 56.2 31 77.4
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.1e-06 56.2 32 78.1
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-06 56.2 32 78.1
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.1e-06 56.2 32 78.1
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.1e-06 56.2 32 78.1
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 4.1e-06 54.3 31 77.4
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 4.1e-06 54.3 31 77.4


User provided reference genes

Program Settings