Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 8.7e-44 179.9 88 100.0
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 1.1e-33 146.4 93 79.6
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 1.1e-33 146.4 93 79.6
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 1.1e-33 146.4 93 79.6
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 3.1e-33 144.8 93 78.5
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 4.5e-32 141.0 93 77.4
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.3e-31 139.4 93 79.6
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.7e-31 139.0 93 78.5
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.7e-31 139.0 93 78.5
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.7e-31 139.0 93 78.5
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 2.9e-31 138.3 93 77.4
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-31 138.3 93 79.6
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 2.9e-31 138.3 93 78.5
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 2.9e-31 138.3 93 78.5
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 3.8e-31 137.9 93 78.5
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 4.9e-31 137.5 93 78.5
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 77.4
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 8.4e-31 136.7 93 78.5
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 4.2e-30 134.4 93 76.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.2e-30 134.4 93 77.4
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 4.2e-30 134.4 93 77.4
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 5.5e-30 134.0 92 76.1
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.2e-29 132.9 93 76.3
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 2.1e-29 132.1 94 76.6
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 3.5e-29 131.3 93 75.3
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.6e-29 131.0 93 75.3
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.6e-29 131.0 93 75.3
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.6e-29 131.0 93 75.3
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 7.9e-29 130.2 93 74.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.9e-29 130.2 93 74.2
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.9e-28 127.9 93 72.0
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.9e-28 127.9 92 75.0
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 5.1e-28 127.5 93 72.0
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.7e-28 126.7 91 74.7
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.9e-27 125.6 93 65.6
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 7.4e-27 123.6 94 73.4
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 6.2e-26 120.6 83 77.1
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-25 119.8 93 69.9
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.8e-25 119.0 92 71.7
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.6e-24 115.2 99 64.6
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 7.6e-24 113.6 84 73.8
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 7.6e-24 113.6 93 67.7
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 1.3e-23 112.8 94 68.1
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 4.9e-23 110.9 84 71.4
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 4.9e-23 110.9 77 77.9
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 4.9e-23 110.9 77 77.9
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.2e-22 108.2 97 63.9
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 9.3e-22 106.7 90 66.7
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 9.3e-22 106.7 93 63.4
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.1e-21 105.5 93 64.5
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 3.5e-21 104.8 77 74.0
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.0e-20 103.2 93 65.6
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-20 102.1 81 69.1
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.3e-20 102.1 61 85.2
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 2.8e-18 95.1 61 80.3
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 3.7e-18 94.7 81 65.4
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 8.2e-18 93.6 93 61.3
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-17 93.2 61 78.7
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-17 93.2 61 78.7
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 2.4e-17 92.0 68 73.5
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 4.1e-17 91.3 69 71.0
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.3e-17 90.9 61 75.4
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 6.9e-17 90.5 69 71.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.9e-17 90.5 61 77.0
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.9e-17 90.5 61 75.4
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 6.9e-17 90.5 61 75.4
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-16 89.7 61 77.0
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-16 89.7 61 77.0
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-16 89.7 61 77.0
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-16 89.0 74 66.2
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.0e-16 89.0 65 73.8
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 3.4e-16 88.2 65 73.8
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.5e-16 87.8 92 57.6
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 7.7e-16 87.0 74 64.9
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 2.2e-15 85.5 69 68.1
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 2.2e-15 85.5 69 68.1
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 2.9e-15 85.1 74 63.5
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 2.9e-15 85.1 72 66.7
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.0e-15 84.3 61 73.8
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 2.5e-14 82.0 51 84.3
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 7.2e-14 80.5 75 62.7
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 7.2e-14 80.5 51 82.4
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 7.2e-14 80.5 61 72.1
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 1.2e-13 79.7 51 82.4
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 2.7e-13 78.6 51 80.4
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.7e-13 78.6 51 78.4
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 2.3e-12 75.5 51 80.4
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 3.9e-12 74.7 80 61.2
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-12 73.9 51 78.4
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.1e-11 73.2 51 78.4
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 1.1e-11 73.2 63 63.5
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.5e-11 72.0 56 73.2
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.3e-11 71.2 51 72.5
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.3e-11 71.2 51 74.5
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 5.7e-11 70.9 49 73.5
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.7e-10 69.3 51 74.5
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 2.8e-10 68.6 45 75.6
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 2.8e-10 68.6 50 74.0
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 3.7e-10 68.2 63 60.3
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 4.8e-10 67.8 48 75.0
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.2e-10 67.0 51 72.5
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 8.2e-10 67.0 93 48.4
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-09 66.2 44 75.0
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 3.1e-09 65.1 49 69.4
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.2e-08 63.2 50 72.0
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 2.6e-08 62.0 51 66.7
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 1.3e-07 59.7 41 73.2
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 6.5e-07 57.4 41 70.7
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 2.5e-06 55.5 43 69.8
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-06 55.1 41 73.2
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-06 55.1 41 73.2
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 5.5e-06 54.3 54 63.0
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 5.5e-06 54.3 37 64.9
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 5.5e-06 54.3 37 64.9
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 9.4e-06 53.5 49 61.2


User provided reference genes

Program Settings