Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.9e-52 208.8 96 100.0
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 2.3e-21 105.5 120 49.2
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.2e-15 85.1 113 45.1
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 7.1e-15 84.0 40 97.5
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 1.0e-13 80.1 39 94.9
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 5.6e-12 74.3 112 42.9
QL93p0968_0000 Quercus lobata HOM05D008259 ORTHO05D010055 9.6e-12 73.6 40 85.0
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 102 43.1
EL10Ac5g12141 Beta vulgaris HOM05D001716 ORTHO05D004234 2.8e-11 72.0 33 97.0
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 3.6e-11 71.6 101 42.6
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 1.8e-10 69.3 100 42.0
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 4.0e-10 68.2 36 86.1
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.0e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-09 65.5 117 37.6
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 2.2e-08 62.4 88 44.3
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 2.2e-08 62.4 102 39.2
CsaV3_UNG196490 Cucumis sativus L. HOM05D008016 ORTHO05D010588 1.1e-07 60.1 30 86.7
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.4e-07 59.7 30 83.3
BNapus_Darmor_BZH_scaffold_69p00020 Brassica napus HOM05D008016 ORTHO05D010588 3.2e-07 58.5 30 83.3
C02p28730 Brassica napus HOM05D008016 ORTHO05D010588 3.2e-07 58.5 30 83.3
CARHR282370 Cardamine hirsuta HOM05D008016 ORTHO05D010588 3.2e-07 58.5 30 83.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 4.2e-07 58.2 46 69.6
Nitab4.5_0001249g0070 Nicotiana tabacum HOM05D008016 ORTHO05D010588 2.1e-06 55.8 29 79.3
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 2.1e-06 55.8 26 88.5
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.6e-06 54.7 30 80.0
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 7.8e-06 53.9 26 84.6


User provided reference genes

Program Settings