Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.5e-242 842.4 426 100.0
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.1e-224 783.1 409 96.3
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 9.0e-179 630.6 394 78.4
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 2.1e-175 619.4 393 78.9
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 3.5e-175 618.6 393 76.1
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 5.1e-174 614.8 393 76.1
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 5.1e-150 535.0 393 70.7
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 1.2e-133 480.7 395 60.3
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.5e-130 469.2 393 59.5
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 5.9e-130 468.4 407 58.2
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.3e-129 467.2 393 60.1
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.9e-128 463.4 393 58.8
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 2.1e-127 459.9 393 59.5
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 6.8e-126 454.9 393 58.0
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 8.6e-121 438.0 393 57.0
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 3.3e-120 436.0 373 57.9
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 2.4e-115 419.9 389 53.5
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 4.5e-114 415.6 397 54.4
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 3.8e-113 412.5 389 56.0
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.2e-111 407.5 389 52.2
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 4.7e-111 405.6 391 51.2
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 6.1e-111 405.2 393 52.4
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.0e-110 404.4 376 54.0
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 6.8e-110 401.7 393 49.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.5e-109 400.6 389 53.2
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.5e-109 400.6 392 51.0
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.5e-109 400.6 392 50.8
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 3.4e-109 399.4 391 50.4
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 5.8e-109 398.7 392 50.8
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 7.5e-109 398.3 409 50.4
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.2e-108 396.7 392 50.5
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.9e-108 396.4 392 50.3
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.1e-107 394.4 391 53.5
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 1.1e-107 394.4 389 49.9
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 1.4e-107 394.0 393 52.2
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 2.7e-106 389.8 389 50.1
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 2.7e-106 389.8 389 52.7
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 3.5e-106 389.4 391 52.9
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 4.6e-106 389.0 393 49.6
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 6.0e-106 388.7 386 51.6
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.5e-104 384.0 395 51.6
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.9e-104 383.6 391 51.9
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.9e-104 383.6 393 49.4
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.3e-104 382.5 390 49.0
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 4.3e-104 382.5 389 48.6
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 9.5e-104 381.3 389 48.8
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 9.5e-104 381.3 390 47.4
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 2.1e-103 380.2 389 47.3
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 3.6e-103 379.4 395 46.8
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.4e-102 377.5 389 49.6
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 4.0e-102 375.9 391 50.6
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 4.0e-102 375.9 393 49.1
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.2e-101 374.4 393 47.1
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.6e-101 373.2 389 48.8
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 3.4e-101 372.9 393 46.6
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.3e-100 370.9 405 45.4
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 2.2e-100 370.2 394 47.5
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 4.9e-100 369.0 393 47.8
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 4.9e-100 369.0 393 46.8
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 6.4e-100 368.6 396 46.5
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.9e-99 367.1 393 46.1
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.9e-99 367.1 391 47.8
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 2.4e-99 366.7 394 45.9
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 4.6e-98 362.5 390 47.4
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.3e-97 360.1 395 44.6
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 1.5e-96 357.5 395 46.1
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 6.2e-95 352.1 392 47.2
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 1.1e-94 351.3 392 45.7
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 1.4e-94 350.9 397 44.8
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 8.9e-94 348.2 393 48.1
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 1.5e-93 347.4 394 45.7
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 2.0e-93 347.1 394 47.0
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 3.4e-93 346.3 394 45.9
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 3.4e-93 346.3 410 44.9
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 7.5e-93 345.1 391 45.0
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.7e-92 344.0 389 45.5
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 4.9e-92 342.4 392 46.2
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 4.9e-92 342.4 390 43.3
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 8.3e-92 341.7 398 44.5
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.4e-91 340.9 349 49.9
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.9e-91 340.5 392 44.9
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 2.4e-91 340.1 399 45.1
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 4.1e-91 339.3 389 44.7
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 4.1e-91 339.3 390 45.4
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 6.0e-90 335.5 394 44.7
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.3e-89 334.3 391 44.8
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.3e-89 334.3 394 44.4
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 2.3e-89 333.6 389 42.9
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 8.6e-89 331.6 390 46.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 8.6e-89 331.6 310 56.1
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.5e-88 330.9 389 42.2
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 3.3e-88 329.7 417 41.5
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 7.3e-88 328.6 399 43.9
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 2.8e-87 326.6 400 42.8
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 3.6e-87 326.2 402 44.0
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.3e-84 317.8 416 39.7
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.3e-84 317.8 416 39.7
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 8.4e-84 315.1 335 49.0
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 1.9e-83 313.9 398 43.0
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 3.2e-83 313.2 416 38.9
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 4.2e-83 312.8 390 41.0
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.2e-82 311.2 262 59.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 2.3e-81 307.0 418 39.7
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.5e-80 304.3 394 42.9
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 5.3e-78 295.8 399 39.8
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 9.9e-77 291.6 269 53.5
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.1e-75 285.4 389 38.6
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.2e-74 284.6 375 39.7
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 4.6e-74 282.7 315 47.9
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.7e-73 280.8 389 38.8
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 8.7e-73 278.5 294 50.0
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 4.6e-58 229.6 177 65.0
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 2.5e-56 223.8 424 34.0
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 1.7e-36 157.9 247 34.8
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 3.9e-33 146.7 398 28.4
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 2.2e-31 141.0 187 46.0
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.4e-30 138.3 259 32.0
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 5.9e-29 132.9 246 32.5
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 4.1e-22 110.2 229 30.6
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 4.1e-22 110.2 292 27.1
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 5.9e-21 106.3 428 26.4
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.2e-20 104.4 375 24.3
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.2e-20 104.4 375 24.3
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 3.2e-19 100.5 179 35.8
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 2.7e-18 97.4 323 22.9
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 3.6e-18 97.1 258 26.7
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 9.8e-16 89.0 177 33.9
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 1.2e-13 82.0 104 40.4
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 3.5e-13 80.5 261 25.7
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 1.0e-09 68.9 285 27.0
Dinv09820 Davidia involucrata HOM05D000025 ORTHO05D000450 1.4e-09 68.6 47 72.3


User provided reference genes

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