Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.3e-103 379.8 202 100.0
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 2.3e-84 315.8 195 88.7
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 7.8e-56 221.1 199 69.3
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 5.4e-49 198.4 215 59.5
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 6.6e-47 191.4 200 62.0
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 2.8e-45 186.0 192 57.3
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 3.6e-45 185.7 191 62.3
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 5.2e-44 181.8 191 56.5
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 1.2e-43 180.6 187 61.0
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 4.4e-43 178.7 193 56.5
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 2.9e-42 176.0 188 58.5
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 4.9e-42 175.3 190 53.7
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 6.4e-42 174.9 196 52.0
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 1.1e-41 174.1 187 58.3
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 4.2e-41 172.2 194 56.7
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 3.5e-40 169.1 191 56.0
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 6.0e-40 168.3 189 58.2
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 6.0e-40 168.3 189 58.2
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 8.7e-39 164.5 187 51.9
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 2.5e-38 162.9 194 51.5
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 4.3e-38 162.2 188 52.1
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 7.3e-38 161.4 186 55.9
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 9.6e-38 161.0 190 54.2
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 1.3e-37 160.6 191 54.5
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 1.3e-37 160.6 191 54.5
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 2.1e-37 159.8 189 52.4
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 2.1e-37 159.8 193 53.9
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 2.8e-37 159.5 181 56.9
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 4.8e-37 158.7 189 54.0
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 1.1e-36 157.5 197 51.8
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 1.4e-36 157.1 198 50.5
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 1.4e-36 157.1 191 52.4
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.9e-36 154.8 193 52.8
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 9.0e-36 154.5 194 52.1
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.5e-35 153.7 184 53.3
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 2.0e-35 153.3 194 51.5
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 5.8e-35 151.8 196 49.0
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 2.2e-34 149.8 190 52.6
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 2.9e-34 149.4 192 51.6
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 4.9e-34 148.7 182 50.0
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 6.4e-34 148.3 186 51.6
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 8.4e-34 147.9 189 52.9
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 1.4e-33 147.1 168 57.7
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 1.9e-33 146.7 194 50.0
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 7.1e-33 144.8 192 49.5
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 9.3e-33 144.4 185 49.7
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 9.3e-33 144.4 186 48.9
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.2e-32 144.1 187 50.3
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 1.6e-32 143.7 202 48.5
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 2.1e-32 143.3 187 49.2
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 2.7e-32 142.9 179 51.4
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 3.5e-32 142.5 187 50.3
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 6.0e-32 141.7 186 48.4
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 6.0e-32 141.7 187 49.2
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 1.3e-31 140.6 187 48.7
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 1.7e-31 140.2 187 47.1
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 6.6e-31 138.3 202 46.5
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 6.6e-31 138.3 197 46.2
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 8.7e-31 137.9 192 48.4
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.5e-30 137.1 186 47.8
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 1.5e-30 137.1 188 48.9
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 2.5e-30 136.3 190 49.5
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 4.3e-30 135.6 152 57.9
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 1.6e-29 133.7 198 47.0
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 3.6e-29 132.5 190 47.9
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 3.6e-29 132.5 166 55.4
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 4.8e-29 132.1 185 44.3
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 4.8e-29 132.1 187 46.0
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.8e-28 130.2 187 44.4
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 6.9e-28 128.3 188 45.2
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 9.0e-28 127.9 190 44.7
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 1.5e-27 127.1 188 47.3
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 4.5e-27 125.6 184 47.8
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 4.5e-27 125.6 159 52.8
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 5.8e-27 125.2 190 43.7
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 9.9e-27 124.4 187 44.4
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 1.3e-26 124.0 191 45.0
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 1.3e-26 124.0 192 43.8
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 2.2e-26 123.2 189 43.4
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 2.9e-26 122.9 188 44.7
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 3.8e-26 122.5 189 45.5
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 4.9e-26 122.1 188 41.0
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 1.4e-25 120.6 188 44.1
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 1.4e-25 120.6 188 44.1
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.4e-25 120.6 187 42.2
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 2.4e-25 119.8 187 41.7
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 2.4e-25 119.8 187 46.5
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 2.4e-25 119.8 161 50.3
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 3.2e-25 119.4 181 43.1
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 3.2e-25 119.4 187 41.7
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 3.2e-25 119.4 188 43.6
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 4.2e-25 119.0 187 46.5
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 5.4e-25 118.6 187 41.7
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 1.2e-24 117.5 188 42.6
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.6e-24 117.1 194 40.2
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 2.1e-24 116.7 197 44.2
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 2.7e-24 116.3 188 43.1
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 2.7e-24 116.3 188 43.1
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 3.5e-24 115.9 188 43.1
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 6.0e-24 115.2 188 42.0
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 6.0e-24 115.2 188 42.0
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 6.0e-24 115.2 157 47.8
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 7.9e-24 114.8 163 46.6
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 7.9e-24 114.8 187 44.9
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 1.0e-23 114.4 190 40.5
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 1.0e-23 114.4 169 45.6
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 1.8e-23 113.6 188 41.5
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 1.8e-23 113.6 165 47.3
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 6.7e-23 111.7 188 42.6
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 8.7e-23 111.3 188 41.0
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 8.7e-23 111.3 188 41.0
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 8.7e-23 111.3 188 41.5
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 8.7e-23 111.3 188 41.5
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 3.3e-22 109.4 189 38.1
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 7.4e-22 108.2 187 41.7
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 9.6e-22 107.8 162 45.1
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 1.3e-21 107.5 188 37.8
Cc06_g14060 Coffea canephora HOM05D004507 ORTHO05D004874 6.2e-21 105.1 193 41.5
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 2.0e-19 100.1 185 36.8
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 2.6e-19 99.8 190 40.0
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 6.5e-18 95.1 168 41.1
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.9e-17 93.6 184 37.5
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 1.9e-17 93.6 159 42.1
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 1.9e-17 93.6 180 38.9
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 9.3e-17 91.3 185 36.2
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 2.7e-16 89.7 185 38.9
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 4.6e-16 89.0 181 38.7
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 4.6e-16 89.0 96 60.4
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 7.9e-16 88.2 184 35.9
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 7.9e-16 88.2 180 36.1
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.8e-15 87.0 185 36.2
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 5.1e-15 85.5 185 37.3
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 5.1e-15 85.5 174 38.5
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 1.5e-14 84.0 179 36.3
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 5.7e-14 82.0 184 35.9
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 5.7e-14 82.0 184 35.9
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 7.4e-14 81.6 201 32.8
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 9.6e-14 81.3 184 35.9
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 9.6e-14 81.3 184 35.9
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 2.1e-13 80.1 193 31.6
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 2.1e-13 80.1 59 72.9
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 6.2e-13 78.6 184 35.3
SEGI_26334 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 1.1e-12 77.8 189 31.2
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 1.2e-11 74.3 148 37.2
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 5.8e-11 72.0 192 33.3
SalBow1G3357 Salvia bowleyana HOM05D004507 ORTHO05D004874 1.3e-10 70.9 87 46.0
Zm00001eb233860 Zea mays HOM05D004507 ORTHO05D004874 1.1e-09 67.8 62 46.8
SEGI_00160 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 1.3e-07 60.8 209 28.7
SEGI_25117 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 6.7e-07 58.5 198 31.3
SEGI_22868 Sequoiadendron giganteum HOM05D001624 ORTHO05D001530 8.7e-07 58.2 194 28.9
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 1.1e-06 57.8 193 28.0
SEGI_03314 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 3.3e-06 56.2 192 30.2
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 5.7e-06 55.5 91 35.2
SEGI_14977 Sequoiadendron giganteum HOM05D016169 ORTHO05D004874 9.7e-06 54.7 195 30.3
SEGI_39312 Sequoiadendron giganteum HOM05D004507 ORTHO05D004874 9.7e-06 54.7 158 28.5


User provided reference genes

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