Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007375g0050 Nicotiana tabacum HOM05D000704 ORTHO05D000526 1.0e-31 139.4 71 100.0
CAN.G473.110 Capsicum annuum HOM05D000704 ORTHO05D000526 1.2e-08 62.8 32 96.9
Peaxi162Scf00420g00571 Petunia axillaris HOM05D000704 ORTHO05D000526 1.1e-07 59.7 32 90.6
EL10Ac6g15425 Beta vulgaris HOM05D000704 ORTHO05D000526 1.4e-07 59.3 32 87.5
AL7G48570 Arabidopsis lyrata HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
AT5G40980 Arabidopsis thaliana HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
BcaC02g08985 Brassica carinata HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
A04p14040 Brassica napus HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
A07p20620 Brassica napus HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
C04p48070 Brassica napus HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
C06p19520 Brassica napus HOM05D048828 ORTHO05D032838 1.8e-07 58.9 32 87.5
BolC4t26399H Brassica oleracea HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
BolC6t37145H Brassica oleracea HOM05D000704 ORTHO05D032838 1.8e-07 58.9 32 87.5
BraA04t17066Z Brassica rapa HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
BraA07t29751Z Brassica rapa HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
Carub.0007s3452 Capsella rubella HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
CARHR213400 Cardamine hirsuta HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
Thhalv10028017m.g Eutrema salsugineum HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
MD17G1001100 Malus domestica HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 90.6
Sp7g00940 Schrenkiella parvula HOM05D000704 ORTHO05D000526 1.8e-07 58.9 32 87.5
BcaB02g07917 Brassica carinata HOM05D000704 ORTHO05D000526 2.4e-07 58.5 32 84.4
Migut.F00054 Erythranthe guttata HOM05D000704 ORTHO05D000526 2.4e-07 58.5 32 90.6
SGA_v2.0_scaffold47G17602 Striga asiatica HOM05D000704 ORTHO05D000526 2.4e-07 58.5 29 96.6
TWI60G0874 Tripterygium wilfordii HOM05D000704 ORTHO05D000526 2.4e-07 58.5 32 90.6
CAN.G1280.49 Capsicum annuum HOM05D000704 ORTHO05D000526 3.1e-07 58.2 31 93.5
Cc07_g00960 Coffea canephora HOM05D000704 ORTHO05D000526 3.1e-07 58.2 32 90.6
Sc03g0006400 Simmondsia chinensis HOM05D000704 ORTHO05D000526 3.1e-07 58.2 32 84.4
BcaB06g27582 Brassica carinata HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 84.4
CSS0028221 Camellia sinensis var. sinensis HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
CSS0035680 Camellia sinensis var. sinensis HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
Ciclev10017392m.g Citrus clementina HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
Duzib147G0474 Durio zibethinus HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 84.4
Thhalv10005242m.g Eutrema salsugineum HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 84.4
FAN05G5140 Fragaria x ananassa HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
FAN09G4297 Fragaria x ananassa HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
Manes.17G102466 Manihot esculenta HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
PGR142G3212 Punica granatum HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
THA.LOC109117188 Tarenaya hassleriana HOM05D000704 ORTHO05D000526 4.0e-07 57.8 32 87.5
FAN14G0183 Fragaria x ananassa HOM05D000704 ORTHO05D000526 5.2e-07 57.4 32 84.4
SHI04041 Sapria himalayana HOM05D000704 ORTHO05D000526 5.2e-07 57.4 32 84.4
THA.LOC109116336 Tarenaya hassleriana HOM05D000704 ORTHO05D000526 5.2e-07 57.4 32 84.4
BcaC06g31025 Brassica carinata HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 81.2
BcaC06g33865 Brassica carinata HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 81.2
A06p41530 Brassica napus HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 81.2
C07p36130 Brassica napus HOM05D001239 ORTHO05D000925 6.8e-07 57.0 32 81.2
BolC7t44128H Brassica oleracea HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 81.2
BraA06t27078Z Brassica rapa HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 81.2
CsaV3_2G034050 Cucumis sativus L. HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 87.5
Prupe.3G307600 Prunus persica HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 84.4
SalBow4G0410 Salvia bowleyana HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 87.5
Sed0002428 Sechium edule HOM05D000704 ORTHO05D000526 6.8e-07 57.0 32 87.5
Nitab4.5_0000559g0350 Nicotiana tabacum HOM05D000704 ORTHO05D000526 8.9e-07 56.6 32 87.5
Potri.017G064972 Populus trichocarpa HOM05D000704 ORTHO05D000526 8.9e-07 56.6 32 84.4
Sabra17G0058200 Salix brachista HOM05D000704 ORTHO05D000526 8.9e-07 56.6 32 84.4
AL5G16070 Arabidopsis lyrata HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
AT3G27027 Arabidopsis thaliana HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
CANSAT64G2580 Cannabis sativa HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 84.4
Carub.0005s0523 Capsella rubella HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
COL.COLO4_13271 Corchorus olitorius HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
Duzib187G1367 Durio zibethinus HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
Gohir.A07G229700 Gossypium hirsutum HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
Gohir.D07G236900 Gossypium hirsutum HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
Gorai.001G272800 Gossypium raimondii HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
Hma1.2p1_1057F.1_g252750 Hydrangea macrophylla HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 84.4
Thecc.04G039000 Theobroma cacao HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 81.2
TAR371G1133 Trochodendron aralioides HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 84.4
GSVIVG01033069001 Vitis vinifera HOM05D000704 ORTHO05D000526 1.2e-06 56.2 32 84.4
CiPaw.04G037400 Carya illinoinensis HOM05D000704 ORTHO05D000526 1.5e-06 55.8 32 84.4
Potri.001G328701 Populus trichocarpa HOM05D000704 ORTHO05D000526 1.5e-06 55.8 29 89.7
Sp2g16160 Schrenkiella parvula HOM05D000704 ORTHO05D000526 1.5e-06 55.8 32 78.1
CiPaw.03G056900 Carya illinoinensis HOM05D000704 ORTHO05D000526 2.0e-06 55.5 32 84.4
Haze_14887 Corylus avellana HOM05D000704 ORTHO05D000526 2.0e-06 55.5 32 84.4
Os02g0508801 Oryza sativa ssp. japonica HOM05D000704 ORTHO05D000526 2.0e-06 55.5 32 81.2
CSS0021448 Camellia sinensis var. sinensis HOM05D000704 ORTHO05D000526 2.6e-06 55.1 29 89.7
CSS0026321 Camellia sinensis var. sinensis HOM05D000704 ORTHO05D000526 2.6e-06 55.1 29 89.7
Migut.K01473 Erythranthe guttata HOM05D000704 ORTHO05D000526 2.6e-06 55.1 29 86.2
Lj1g0005242 Lotus japonicus HOM05D000704 ORTHO05D000526 2.6e-06 55.1 31 80.6
MD09G1009300 Malus domestica HOM05D000704 ORTHO05D000526 2.6e-06 55.1 32 84.4
QL02p071139 Quercus lobata HOM05D000704 ORTHO05D000526 2.6e-06 55.1 32 81.2
Sed0024721 Sechium edule HOM05D000704 ORTHO05D000526 2.6e-06 55.1 32 84.4
TPR.G28562 Trifolium pratense HOM05D000704 ORTHO05D000526 2.6e-06 55.1 32 81.2
Gohir.A10G073300 Gossypium hirsutum HOM05D000704 ORTHO05D000526 3.4e-06 54.7 32 81.2
Gohir.D10G077800 Gossypium hirsutum HOM05D000704 ORTHO05D000526 3.4e-06 54.7 32 81.2
Gorai.011G084300 Gossypium raimondii HOM05D000704 ORTHO05D000526 3.4e-06 54.7 32 81.2
Manes.15G162400 Manihot esculenta HOM05D000704 ORTHO05D000526 4.4e-06 54.3 32 81.2
Phvul.001G092200 Phaseolus vulgaris HOM05D000704 ORTHO05D000526 4.4e-06 54.3 32 81.2
TWI32G0805 Tripterygium wilfordii HOM05D000704 ORTHO05D000526 4.4e-06 54.3 32 81.2
Glyma.16G054900 Glycine max HOM05D000704 ORTHO05D000526 5.8e-06 53.9 32 78.1
Gohir.A09G037100 Gossypium hirsutum HOM05D000704 ORTHO05D000526 5.8e-06 53.9 30 76.7
Gorai.006G043700 Gossypium raimondii HOM05D000704 ORTHO05D000526 5.8e-06 53.9 30 76.7
Duzib264G0475 Durio zibethinus HOM05D000704 ORTHO05D000526 7.6e-06 53.5 32 75.0
Lalb_Chr22g0360321 Lupinus albus HOM05D000704 ORTHO05D000526 7.6e-06 53.5 32 78.1
Medtr7g028870 Medicago truncatula HOM05D000704 ORTHO05D000526 7.6e-06 53.5 32 78.1
vmacro05967 Vaccinium macrocarpon HOM05D000704 ORTHO05D000526 7.6e-06 53.5 32 75.0
COL.COLO4_20427 Corchorus olitorius HOM05D000704 ORTHO05D000526 9.9e-06 53.1 31 74.2
Glyma.18G005000 Glycine max HOM05D000704 ORTHO05D000526 9.9e-06 53.1 31 74.2
Lalb_Chr00c01g0403691 Lupinus albus HOM05D000704 ORTHO05D000526 9.9e-06 53.1 32 78.1
TPR.G24772 Trifolium pratense HOM05D000704 ORTHO05D000526 9.9e-06 53.1 31 80.6
TPR.G28565 Trifolium pratense HOM05D000704 ORTHO05D000526 9.9e-06 53.1 31 80.6


User provided reference genes

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