Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007375g0040 Nicotiana tabacum HOM05D002793 ORTHO05D002965 3.2e-113 411.8 209 100.0
Nitab4.5_0007375g0030 Nicotiana tabacum HOM05D002793 ORTHO05D002965 8.3e-93 344.0 208 86.1
Peaxi162Scf00420g00652 Petunia axillaris HOM05D002793 ORTHO05D002965 4.7e-48 195.3 291 46.0
PGSC0003DMG400020205 Solanum tuberosum HOM05D002793 ORTHO05D002965 1.0e-34 151.0 222 51.4
CAN.G473.119 Capsicum annuum HOM05D002793 ORTHO05D002965 1.1e-33 147.5 208 49.5
Nitab4.5_0027193g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 2.5e-33 146.4 291 41.2
Nitab4.5_0000559g0300 Nicotiana tabacum HOM05D002793 ORTHO05D002965 9.0e-31 137.9 322 37.0
Cc00_g14540 Coffea canephora HOM05D002793 ORTHO05D002965 4.0e-15 85.9 325 28.9
Dinv33324 Davidia involucrata HOM05D002793 ORTHO05D002965 2.2e-13 80.1 292 28.4
Actinidia30867 Actinidia chinensis HOM05D002793 ORTHO05D002965 2.9e-13 79.7 273 31.1
Dinv25648 Davidia involucrata HOM05D002793 ORTHO05D002965 8.4e-13 78.2 317 29.7
CSS0004091 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.1e-11 73.6 300 27.7
Sed0009839 Sechium edule HOM05D002793 ORTHO05D002965 2.1e-11 73.6 127 41.7
Eucgr.H04615 Eucalyptus grandis HOM05D002793 ORTHO05D002965 1.3e-10 70.9 148 35.8
Potri.003G168700 Populus trichocarpa HOM05D002793 ORTHO05D002965 3.9e-10 69.3 152 34.9
CSS0011475 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 5.1e-10 68.9 323 26.0
Sabra01G0042600 Salix brachista HOM05D002793 ORTHO05D002965 6.7e-10 68.6 154 36.4
ClCG06G002060 Citrullus lanatus HOM05D002793 ORTHO05D002965 8.7e-10 68.2 146 37.7
Duzib268G1080 Durio zibethinus HOM05D002793 ORTHO05D002965 8.7e-10 68.2 136 37.5
Ah.03g135970 Amaranthus hybridus HOM05D002793 ORTHO05D002965 1.1e-09 67.8 127 33.1
AUR62005649 Chenopodium quinoa HOM05D002793 ORTHO05D002965 1.5e-09 67.4 126 33.3
PGR142G0558 Punica granatum HOM05D002793 ORTHO05D002965 2.5e-09 66.6 140 37.1
EL10Ac6g13537 Beta vulgaris HOM05D002793 ORTHO05D002965 4.3e-09 65.9 139 34.5
GSVIVG01010528001 Vitis vinifera HOM05D002793 ORTHO05D002965 4.3e-09 65.9 147 36.7
MSTRG.484 Avicennia marina HOM05D002793 ORTHO05D002965 5.7e-09 65.5 140 36.4
Manes.11G086900 Manihot esculenta HOM05D002793 ORTHO05D002965 7.4e-09 65.1 135 33.3
Phvul.007G001200 Phaseolus vulgaris HOM05D002793 ORTHO05D002965 7.4e-09 65.1 133 35.3
Potri.001G059100 Populus trichocarpa HOM05D002793 ORTHO05D002965 7.4e-09 65.1 59 61.0
TWI36G0224 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 7.4e-09 65.1 142 36.6
Nitab4.5_0000542g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 9.7e-09 64.7 254 29.1
Duzib147G0228 Durio zibethinus HOM05D002793 ORTHO05D002965 1.3e-08 64.3 250 29.2
Prupe.1G222800 Prunus persica HOM05D002793 ORTHO05D002965 1.3e-08 64.3 137 38.0
Sc04g0010290 Simmondsia chinensis HOM05D002793 ORTHO05D002965 1.3e-08 64.3 135 37.0
VMungo1383G2953 Vigna mungo HOM05D002793 ORTHO05D002965 1.3e-08 64.3 129 34.9
COL.COLO4_05010 Corchorus olitorius HOM05D002793 ORTHO05D002965 1.6e-08 63.9 142 34.5
Gohir.D04G075300 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.6e-08 63.9 169 30.8
Gohir.D05G311000 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.6e-08 63.9 135 37.0
Gorai.009G332000 Gossypium raimondii HOM05D002793 ORTHO05D002965 1.6e-08 63.9 135 37.0
Gorai.012G084800 Gossypium raimondii HOM05D002793 ORTHO05D002965 1.6e-08 63.9 169 30.8
Phvul.008G017100 Phaseolus vulgaris HOM05D002793 ORTHO05D002965 1.6e-08 63.9 137 35.8
QL03p051728 Quercus lobata HOM05D002793 ORTHO05D002965 1.6e-08 63.9 141 36.2
Lj1g0015564 Lotus japonicus HOM05D002793 ORTHO05D002965 2.2e-08 63.5 147 33.3
SGA_v2.0_scaffold47G17616 Striga asiatica HOM05D002793 ORTHO05D002965 2.2e-08 63.5 141 35.5
CANSAT01G0958 Cannabis sativa HOM05D002793 ORTHO05D002965 2.8e-08 63.2 57 63.2
MELO3C032845.2 Cucumis melo HOM05D002793 ORTHO05D002965 2.8e-08 63.2 133 33.1
Lalb_Chr00c01g0403751 Lupinus albus HOM05D002793 ORTHO05D002965 2.8e-08 63.2 207 26.6
Gohir.A05G310200 Gossypium hirsutum HOM05D002793 ORTHO05D002965 3.7e-08 62.8 135 37.0
Rhsim08G0041700 Rhododendron simsii HOM05D002793 ORTHO05D002965 3.7e-08 62.8 322 25.5
TPR.G2957 Trifolium pratense HOM05D002793 ORTHO05D002965 3.7e-08 62.8 89 44.9
CsaV3_6G008130 Cucumis sativus L. HOM05D002793 ORTHO05D002965 4.8e-08 62.4 146 35.6
Glyma.18G284400 Glycine max HOM05D002793 ORTHO05D002965 4.8e-08 62.4 130 36.2
MD13G1122400 Malus domestica HOM05D002793 ORTHO05D002965 4.8e-08 62.4 137 35.0
Thecc.02G201800 Theobroma cacao HOM05D002793 ORTHO05D002965 4.8e-08 62.4 141 35.5
AUR62028901 Chenopodium quinoa HOM05D002793 ORTHO05D002965 6.3e-08 62.0 72 43.1
Ciclev10031707m.g Citrus clementina HOM05D002793 ORTHO05D002965 6.3e-08 62.0 63 55.6
Lalb_Chr10g0092031 Lupinus albus HOM05D002793 ORTHO05D002965 6.3e-08 62.0 144 34.0
Dinv11689 Davidia involucrata HOM05D002793 ORTHO05D002965 8.2e-08 61.6 145 34.5
Glyma.10G298100 Glycine max HOM05D002793 ORTHO05D002965 8.2e-08 61.6 131 36.6
Peaxi162Scf00128g01542 Petunia axillaris HOM05D002793 ORTHO05D002965 8.2e-08 61.6 140 35.0
THA.LOC104825488 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 8.2e-08 61.6 146 32.9
Eucgr.B03523 Eucalyptus grandis HOM05D002793 ORTHO05D002965 1.1e-07 61.2 164 32.3
FvH4_4g23460 Fragaria vesca HOM05D002793 ORTHO05D002965 1.1e-07 61.2 144 34.7
FAN12G0240 Fragaria x ananassa HOM05D002793 ORTHO05D002965 1.1e-07 61.2 144 34.7
TPR.G8576 Trifolium pratense HOM05D002793 ORTHO05D002965 1.1e-07 61.2 155 32.3
CiPaw.05G107100 Carya illinoinensis HOM05D002793 ORTHO05D002965 1.4e-07 60.8 137 35.0
RcHm_v2.0_Chr4g0429831 Rosa chinensis HOM05D002793 ORTHO05D002965 1.4e-07 60.8 144 34.0
vmacro16095 Vaccinium macrocarpon HOM05D002793 ORTHO05D002965 1.4e-07 60.8 57 57.9
Cpa.g.sc286.6 Carica papaya HOM05D002793 ORTHO05D002965 1.8e-07 60.5 141 36.9
CsaV3_4G003020 Cucumis sativus L. HOM05D002793 ORTHO05D002965 1.8e-07 60.5 155 31.6
GSVIVG01033059001 Vitis vinifera HOM05D002793 ORTHO05D002965 1.8e-07 60.5 153 34.0
Haze_12447 Corylus avellana HOM05D002793 ORTHO05D002965 2.4e-07 60.1 142 35.9
Thecc.04G040100 Theobroma cacao HOM05D002793 ORTHO05D002965 2.4e-07 60.1 236 28.0
TWI18G1253 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 2.4e-07 60.1 66 56.1
Gohir.A05G336800 Gossypium hirsutum HOM05D002793 ORTHO05D002965 3.1e-07 59.7 169 29.6
Lalb_Chr22g0360281 Lupinus albus HOM05D002793 ORTHO05D002965 3.1e-07 59.7 281 26.0
Medtr3g085710 Medicago truncatula HOM05D002793 ORTHO05D002965 3.1e-07 59.7 151 32.5
Actinidia16924 Actinidia chinensis HOM05D002793 ORTHO05D002965 4.1e-07 59.3 288 27.1
CiPaw.06G105000 Carya illinoinensis HOM05D002793 ORTHO05D002965 5.3e-07 58.9 143 33.6
ClCG07G015430 Citrullus lanatus HOM05D002793 ORTHO05D002965 5.3e-07 58.9 62 54.8
COL.COLO4_13290 Corchorus olitorius HOM05D002793 ORTHO05D002965 5.3e-07 58.9 237 27.8
SGA_v2.0_scaffold253G45184 Striga asiatica HOM05D002793 ORTHO05D002965 5.3e-07 58.9 152 34.2
THA.LOC104801635 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
THA.LOC104801637 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
THA.LOC104801639 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
THA.LOC104804714 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
THA.LOC104816114 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
THA.LOC104816116 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.3e-07 58.9 150 32.7
FAN07G0273 Fragaria x ananassa HOM05D002793 ORTHO05D002965 9.0e-07 58.2 144 34.0
Sabra03G0123600 Salix brachista HOM05D002793 ORTHO05D002965 9.0e-07 58.2 59 59.3
Migut.F00050 Erythranthe guttata HOM05D002793 ORTHO05D002965 1.2e-06 57.8 79 46.8
Glyma.20G249200 Glycine max HOM05D002793 ORTHO05D002965 1.2e-06 57.8 144 34.0
Psat3g162720 Pisum sativum HOM05D002793 ORTHO05D002965 1.2e-06 57.8 70 54.3
Atru.chr11.2359 Acer truncatum HOM05D002793 ORTHO05D002965 1.5e-06 57.4 85 41.2
Glyma.02G097100 Glycine max HOM05D002793 ORTHO05D002965 1.5e-06 57.4 138 34.1
Solyc05g015880.3 Solanum lycopersicum HOM05D002793 ORTHO05D002965 1.5e-06 57.4 146 32.2
PGSC0003DMG401019811 Solanum tuberosum HOM05D002793 ORTHO05D002965 1.5e-06 57.4 146 32.2
CSS0013139 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.0e-06 57.0 145 33.1
CSS0031398 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.0e-06 57.0 145 33.1
PGR102G2389 Punica granatum HOM05D002793 ORTHO05D002965 2.0e-06 57.0 148 33.1
arahy.Tifrunner.gnm1.ann1.BJT98M Arachis hypogaea HOM05D002793 ORTHO05D002965 2.6e-06 56.6 148 32.4
arahy.Tifrunner.gnm1.ann1.S8FHU4 Arachis hypogaea HOM05D002793 ORTHO05D002965 2.6e-06 56.6 148 32.4
arahy.Tifrunner.gnm1.ann1.QV3UQR Arachis hypogaea HOM05D002793 ORTHO05D002965 3.4e-06 56.2 111 36.9
Lj6A830G30 Lonicera japonica HOM05D002793 ORTHO05D002965 3.4e-06 56.2 145 33.1
Medtr7g022360 Medicago truncatula HOM05D002793 ORTHO05D002965 3.4e-06 56.2 89 38.2
Lsat_1_v5_gn_3_31200 Lactuca sativa HOM05D002793 ORTHO05D002965 4.5e-06 55.8 67 52.2
PGR119G2529 Punica granatum HOM05D002793 ORTHO05D002965 4.5e-06 55.8 68 50.0
TPR.G8908 Trifolium pratense HOM05D002793 ORTHO05D002965 5.9e-06 55.5 152 32.2
VMungo0720G0739 Vigna mungo HOM05D002793 ORTHO05D002965 5.9e-06 55.5 93 39.8
arahy.Tifrunner.gnm1.ann1.ZG4VZM Arachis hypogaea HOM05D002793 ORTHO05D002965 7.7e-06 55.1 207 28.0
Manes.12G008500 Manihot esculenta HOM05D002793 ORTHO05D002965 7.7e-06 55.1 257 27.2
TAR629G0254 Trochodendron aralioides HOM05D002793 ORTHO05D002965 7.7e-06 55.1 135 33.3
FAN05G3862 Fragaria x ananassa HOM05D002793 ORTHO05D002965 1.0e-05 54.7 260 27.3


User provided reference genes

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