Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007360g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.0e-49 199.1 127 100.0
Nitab4.5_0003495g0040 Nicotiana tabacum HOM05D000355 ORTHO05D000227 9.0e-26 120.6 111 82.0
Peaxi162Scf00235g00024 Petunia axillaris HOM05D000355 ORTHO05D000227 2.1e-22 109.4 107 54.2
CAN.G337.139 Capsicum annuum HOM05D000355 ORTHO05D000227 2.2e-19 99.4 126 55.6
PGSC0003DMG400022315 Solanum tuberosum HOM05D000355 ORTHO05D000227 4.1e-18 95.1 109 71.6
Solyc07g064650.3 Solanum lycopersicum HOM05D000355 ORTHO05D000227 4.5e-17 91.7 121 64.5
Sopen07g032850 Solanum pennellii HOM05D000355 ORTHO05D000227 1.7e-16 89.7 113 65.5
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 5.5e-15 84.7 121 43.0
GSVIVG01037661001 Vitis vinifera HOM05D000355 ORTHO05D000227 7.2e-15 84.3 114 43.9
Cc05_g13870 Coffea canephora HOM05D000355 ORTHO05D000227 3.6e-14 82.0 116 57.8
Rhsim06G0218100 Rhododendron simsii HOM05D000355 ORTHO05D000227 3.6e-14 82.0 116 50.9
DCAR_022567 Daucus carota HOM05D000355 ORTHO05D000227 1.8e-13 79.7 105 44.8
Peaxi162Scf00834g00013 Petunia axillaris HOM05D000355 ORTHO05D000227 3.0e-13 79.0 114 43.9
Oeu041815.1 Olea europaea HOM05D000355 ORTHO05D000227 8.8e-13 77.4 111 47.7
Nn1g03507 Nelumbo nucifera HOM05D000355 ORTHO05D000227 1.1e-12 77.0 117 48.7
Dinv40763 Davidia involucrata HOM05D000355 ORTHO05D000227 1.5e-12 76.6 52 67.3
Sopen10g002230 Solanum pennellii HOM05D000355 ORTHO05D000227 1.5e-12 76.6 110 50.0
TAR624G0087 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.5e-12 76.6 103 50.5
Nn1g07141 Nelumbo nucifera HOM05D000355 ORTHO05D000227 1.9e-12 76.3 118 39.8
MSTRG.15144 Avicennia marina HOM05D000355 ORTHO05D000227 4.3e-12 75.1 102 42.2
MSTRG.6925 Avicennia marina HOM05D000355 ORTHO05D000227 4.3e-12 75.1 122 44.3
Solyc10g006275.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 4.3e-12 75.1 111 49.5
vmacro09705 Vaccinium macrocarpon HOM05D000355 ORTHO05D000227 5.7e-12 74.7 104 44.2
CSS0044358 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 7.4e-12 74.3 121 43.0
RcHm_v2.0_Chr5g0002931 Rosa chinensis HOM05D000355 ORTHO05D000227 1.7e-11 73.2 113 47.8
CAN.G492.2 Capsicum annuum HOM05D000355 ORTHO05D000227 2.2e-11 72.8 100 45.0
QL08p009943 Quercus lobata HOM05D000355 ORTHO05D000227 2.8e-11 72.4 109 47.7
HanXRQChr11g0337281 Helianthus annuus HOM05D000355 ORTHO05D000227 6.3e-11 71.2 108 50.0
RcHm_v2.0_Chr5g0040191 Rosa chinensis HOM05D000355 ORTHO05D000227 6.3e-11 71.2 134 48.5
Duzib192G0607 Durio zibethinus HOM05D000355 ORTHO05D000227 1.1e-10 70.5 107 38.3
Gohir.D05G173600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.4e-10 70.1 107 40.2
TAR627G0409 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.4e-10 70.1 102 40.2
Aqoxy1G02120 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 2.4e-10 69.3 100 53.0
Gohir.A05G170500 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.4e-10 69.3 107 40.2
Gorai.009G178800 Gossypium raimondii HOM05D000355 ORTHO05D000227 2.4e-10 69.3 107 40.2
Prupe.4G214900 Prunus persica HOM05D000355 ORTHO05D000227 2.4e-10 69.3 136 49.3
CiPaw.09G092300 Carya illinoinensis HOM05D000355 ORTHO05D000227 4.1e-10 68.6 107 36.4
Manes.16G006800 Manihot esculenta HOM05D000355 ORTHO05D000227 4.1e-10 68.6 114 37.7
Prupe.4G020000 Prunus persica HOM05D000316 ORTHO05D000374 4.1e-10 68.6 118 53.4
Duzib160G0794 Durio zibethinus HOM05D000355 ORTHO05D000227 5.3e-10 68.2 108 39.8
Sed0024876 Sechium edule HOM05D000355 ORTHO05D000227 9.1e-10 67.4 106 37.7
Thecc.06G221000 Theobroma cacao HOM05D000355 ORTHO05D000227 9.1e-10 67.4 108 38.9
EL10Ac4g07797 Beta vulgaris HOM05D000355 ORTHO05D000227 1.2e-09 67.0 107 45.8
Manes.17G038980 Manihot esculenta HOM05D000355 ORTHO05D000227 1.2e-09 67.0 111 37.8
QL05p073075 Quercus lobata HOM05D000355 ORTHO05D000227 1.2e-09 67.0 125 41.6
Haze_09685 Corylus avellana HOM05D000355 ORTHO05D000227 1.5e-09 66.6 117 48.7
Ah.04g165950 Amaranthus hybridus HOM05D000355 ORTHO05D000227 2.6e-09 65.9 98 48.0
FvH4_3g22890 Fragaria vesca HOM05D000355 ORTHO05D000227 2.6e-09 65.9 119 52.1
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 3.4e-09 65.5 113 44.2
CsaV3_1G010730 Cucumis sativus L. HOM05D000355 ORTHO05D000227 3.4e-09 65.5 99 40.4
Duzib235G0910 Durio zibethinus HOM05D000355 ORTHO05D000227 3.4e-09 65.5 106 40.6
FAN11G1364 Fragaria x ananassa HOM05D000355 ORTHO05D000227 3.4e-09 65.5 119 52.1
FAN21G0059 Fragaria x ananassa HOM05D000355 ORTHO05D000227 3.4e-09 65.5 119 53.8
Oeu062588.1 Olea europaea HOM05D000355 ORTHO05D000227 3.4e-09 65.5 98 40.8
Sc16g0005960 Simmondsia chinensis HOM05D000355 ORTHO05D000227 3.4e-09 65.5 107 42.1
ClCG03G004700 Citrullus lanatus HOM05D000355 ORTHO05D000227 5.9e-09 64.7 104 37.5
FAN25G2862 Fragaria x ananassa HOM05D000355 ORTHO05D000227 5.9e-09 64.7 117 52.1
Gohir.D09G068900 Gossypium hirsutum HOM05D000355 ORTHO05D000227 5.9e-09 64.7 107 37.4
Gorai.006G083100 Gossypium raimondii HOM05D000355 ORTHO05D000227 5.9e-09 64.7 107 37.4
CSS0004295 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 7.7e-09 64.3 136 50.0
MELO3C002454.2 Cucumis melo HOM05D000355 ORTHO05D000227 7.7e-09 64.3 97 38.1
Glyma.14G023100 Glycine max HOM05D000355 ORTHO05D000227 7.7e-09 64.3 121 36.4
TWI63G0422 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 7.7e-09 64.3 105 42.9
CiPaw.11G190500 Carya illinoinensis HOM05D000355 ORTHO05D000227 1.0e-08 63.9 111 56.8
TAR626G1504 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.0e-08 63.9 110 51.8
Cfa020334 Carpinus fangiana HOM05D000355 ORTHO05D000227 1.3e-08 63.5 116 41.4
Mapoly0006s0294 Marchantia polymorpha HOM05D000355 ORTHO05D000227 1.3e-08 63.5 117 39.3
VMungo0647G1125 Vigna mungo HOM05D000355 ORTHO05D000227 1.3e-08 63.5 129 35.7
FAN25G1886 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.7e-08 63.2 110 34.5
AUR62020432 Chenopodium quinoa HOM05D000355 ORTHO05D000227 2.2e-08 62.8 117 35.0
ClCG01G021970 Citrullus lanatus HOM05D000355 ORTHO05D000227 2.2e-08 62.8 96 33.3
Phvul.008G268000 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 2.2e-08 62.8 129 47.3
Sabra11G0003200 Salix brachista HOM05D000355 ORTHO05D000227 2.2e-08 62.8 108 37.0
Glyma.13G204600 Glycine max HOM05D000355 ORTHO05D000227 2.9e-08 62.4 114 43.9
Nitab4.5_0004829g0040 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.9e-08 62.4 48 68.8
SHI26591 Sapria himalayana HOM05D000355 ORTHO05D000227 2.9e-08 62.4 129 41.1
Lj6g0010284 Lotus japonicus HOM05D000355 ORTHO05D000227 3.8e-08 62.0 131 38.2
Lalb_Chr10g0107031 Lupinus albus HOM05D000355 ORTHO05D000227 3.8e-08 62.0 114 35.1
PSO210G2867 Papaver somniferum HOM05D000355 ORTHO05D000227 3.8e-08 62.0 110 38.2
VMungo0540G2432 Vigna mungo HOM05D000355 ORTHO05D000227 3.8e-08 62.0 98 35.7
FAN16G3532 Fragaria x ananassa HOM05D000355 ORTHO05D000227 6.5e-08 61.2 114 54.4
Lsat_1_v5_gn_7_109900 Lactuca sativa HOM05D000355 ORTHO05D000227 8.5e-08 60.8 117 35.9
Sabra04G0006900 Salix brachista HOM05D000316 ORTHO05D000227 8.5e-08 60.8 110 36.4
VMungo0540G2443 Vigna mungo HOM05D000355 ORTHO05D000227 1.1e-07 60.5 141 43.3
FvH4_3g02030 Fragaria vesca HOM05D000355 ORTHO05D000227 1.4e-07 60.1 107 34.6
PSO832G2499 Papaver somniferum HOM05D000355 ORTHO05D000227 1.4e-07 60.1 110 38.2
Glyma.08G317200 Glycine max HOM05D000355 ORTHO05D000227 1.9e-07 59.7 143 37.8
Lalb_Chr15g0081331 Lupinus albus HOM05D000355 ORTHO05D000227 1.9e-07 59.7 127 39.4
MD05G1347500 Malus domestica HOM05D000355 ORTHO05D000227 1.9e-07 59.7 113 51.3
MELO3C007391.2 Cucumis melo HOM05D000355 ORTHO05D000227 2.5e-07 59.3 97 32.0
Glyma.02G291700 Glycine max HOM05D000355 ORTHO05D000227 2.5e-07 59.3 127 33.1
COL.COLO4_31781 Corchorus olitorius HOM05D000355 ORTHO05D000227 3.2e-07 58.9 101 62.4
CsaV3_6G049040 Cucumis sativus L. HOM05D000355 ORTHO05D000227 3.2e-07 58.9 91 34.1
FAN21G0450 Fragaria x ananassa HOM05D000316 ORTHO05D000374 3.2e-07 58.9 99 33.3
Gohir.A09G068650 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.2e-07 58.9 111 36.0
Phvul.006G044700 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 3.2e-07 58.9 143 37.1
Potri.004G014000 Populus trichocarpa HOM05D000355 ORTHO05D000227 3.2e-07 58.9 101 38.6
arahy.Tifrunner.gnm1.ann1.3YI7N5 Arachis hypogaea HOM05D000355 ORTHO05D000227 4.2e-07 58.5 110 54.5
ECA236G2721 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.2e-07 58.5 103 36.9
MD11G1216500 Malus domestica HOM05D000355 ORTHO05D000227 4.2e-07 58.5 122 37.7
CDE02G3765 Ceratophyllum demersum HOM05D000355 ORTHO05D000227 5.5e-07 58.2 123 34.1
Hma1.2p1_0738F.1_g211100 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 5.5e-07 58.2 105 41.0
Hma1.2p1_2518F.1_g323770 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 5.5e-07 58.2 105 41.0
LjContig00272g0015424 Lotus japonicus HOM05D000355 ORTHO05D000227 5.5e-07 58.2 111 33.3
MD10G1321900 Malus domestica HOM05D000355 ORTHO05D000227 5.5e-07 58.2 97 36.1
Phvul.006G149660 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 5.5e-07 58.2 98 33.7
Glyma.18G095800 Glycine max HOM05D000355 ORTHO05D000227 7.2e-07 57.8 69 47.8
Manes.03G130151 Manihot esculenta HOM05D000355 ORTHO05D000227 7.2e-07 57.8 137 50.4
Potri.011G004100 Populus trichocarpa HOM05D000355 ORTHO05D000227 7.2e-07 57.8 98 37.8
TWI38G1542 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 7.2e-07 57.8 95 42.1
Cfa000216 Carpinus fangiana HOM05D000355 ORTHO05D000227 9.4e-07 57.4 99 38.4
CiPaw.12G130300 Carya illinoinensis HOM05D000355 ORTHO05D000227 9.4e-07 57.4 112 51.8
Gohir.A09G068600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 1.2e-06 57.0 99 33.3
MD03G1199600 Malus domestica HOM05D000355 ORTHO05D000227 1.2e-06 57.0 132 48.5
Medtr2g023390 Medicago truncatula HOM05D000355 ORTHO05D000227 1.6e-06 56.6 77 36.4
Peaxi162Scf00306g00022 Petunia axillaris HOM05D000355 ORTHO05D000227 1.6e-06 56.6 103 35.9
AL7G31730 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 2.1e-06 56.2 106 34.0
Sed0028112 Sechium edule HOM05D000355 ORTHO05D000227 2.1e-06 56.2 94 34.0
Gohir.D09G068800 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.7e-06 55.8 107 33.6
Sed0004831 Sechium edule HOM05D000355 ORTHO05D000227 2.7e-06 55.8 100 34.0
Carub.0006s3247 Capsella rubella HOM05D000355 ORTHO05D000227 3.6e-06 55.5 88 38.6
Gorai.006G082900 Gossypium raimondii HOM05D000355 ORTHO05D000227 3.6e-06 55.5 107 33.6
ATR0794G099 Amborella trichopoda HOM05D000355 ORTHO05D000227 4.7e-06 55.1 104 58.7
AT4G21970 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 4.7e-06 55.1 106 34.0
Glyma.07G260700 Glycine max HOM05D000355 ORTHO05D000227 4.7e-06 55.1 116 41.4
Nitab4.5_0007864g0070 Nicotiana tabacum HOM05D000355 ORTHO05D000227 4.7e-06 55.1 98 35.7
Gohir.A01G080400 Gossypium hirsutum HOM05D000355 ORTHO05D000227 6.1e-06 54.7 115 51.3
TPR.G9943 Trifolium pratense HOM05D000355 ORTHO05D000227 6.1e-06 54.7 95 32.6
Atru.chr10.2233 Acer truncatum HOM05D000355 ORTHO05D000227 7.9e-06 54.3 106 52.8
Medtr3g052330 Medicago truncatula HOM05D000355 ORTHO05D000227 7.9e-06 54.3 132 41.7
Phvul.004G086800 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 7.9e-06 54.3 63 47.6
THA.LOC104813134 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 7.9e-06 54.3 108 52.8
Thecc.07G035000 Theobroma cacao HOM05D000355 ORTHO05D000227 7.9e-06 54.3 134 35.1


User provided reference genes

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