Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.5e-39 165.6 130 100.0
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.2e-35 152.5 127 96.9
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.5e-31 139.8 127 89.8
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 2.5e-31 139.0 124 91.1
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 9.5e-31 137.1 123 93.5
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.2e-30 136.7 127 89.0
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 6.2e-30 134.4 124 89.5
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.5e-28 129.8 123 88.6
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 1.7e-27 126.3 123 87.0
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 2.9e-27 125.6 121 87.6
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 3.7e-27 125.2 125 84.8
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.7e-27 125.2 127 83.5
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 6.4e-27 124.4 123 86.2
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.1e-26 123.6 122 87.7
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 1.4e-26 123.2 127 80.3
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.4e-26 123.2 123 83.7
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.9e-26 122.9 123 82.9
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 2.4e-26 122.5 123 85.4
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 7.1e-26 120.9 121 81.8
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 9.2e-26 120.6 118 86.4
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 1.2e-25 120.2 120 85.0
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.6e-25 119.8 122 86.9
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 2.7e-25 119.0 124 80.6
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 6.0e-25 117.9 124 79.8
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 6.0e-25 117.9 122 83.6
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 7.8e-25 117.5 121 82.6
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 1.0e-24 117.1 121 83.5
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 1.3e-24 116.7 122 84.4
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 1.7e-24 116.3 122 83.6
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 1.7e-24 116.3 122 83.6
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 3.9e-24 115.2 120 84.2
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 5.1e-24 114.8 122 82.8
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 5.1e-24 114.8 126 80.2
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 5.1e-24 114.8 123 82.1
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 6.6e-24 114.4 125 83.2
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 8.6e-24 114.0 123 82.1
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.1e-23 113.6 117 86.3
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.1e-23 113.6 121 83.5
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.1e-23 113.6 127 81.9
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.5e-23 113.2 124 82.3
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.5e-23 112.5 127 81.1
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 3.3e-23 112.1 125 76.0
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 5.6e-23 111.3 124 84.7
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 5.6e-23 111.3 122 83.6
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 7.3e-23 110.9 124 83.9
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.2e-22 110.2 125 80.0
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.2e-22 110.2 125 81.6
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 2.1e-22 109.4 123 80.5
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.6e-22 108.6 121 82.6
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 3.6e-22 108.6 125 80.8
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.6e-22 108.6 125 80.8
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 3.6e-22 108.6 121 81.0
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 4.7e-22 108.2 126 77.8
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 4.7e-22 108.2 126 75.4
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 8.1e-22 107.5 125 76.0
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 8.1e-22 107.5 125 78.4
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 1.4e-21 106.7 91 83.5
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.8e-21 106.3 125 80.0
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.8e-21 106.3 125 82.4
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 3.1e-21 105.5 125 76.8
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 3.1e-21 105.5 125 76.8
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 3.1e-21 105.5 122 78.7
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.1e-21 105.5 120 80.8
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 4.0e-21 105.1 130 79.2
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 4.0e-21 105.1 120 80.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 5.2e-21 104.8 129 76.0
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 5.2e-21 104.8 125 76.0
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 5.2e-21 104.8 125 76.0
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 5.2e-21 104.8 125 76.0
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 5.2e-21 104.8 125 79.2
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 5.2e-21 104.8 126 77.0
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 8.9e-21 104.0 125 76.0
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 2.0e-20 102.8 125 76.0
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 2.0e-20 102.8 125 80.0
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.6e-20 102.4 126 79.4
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 3.4e-20 102.1 88 80.7
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 3.4e-20 102.1 126 77.8
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 5.8e-20 101.3 125 73.6
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 5.8e-20 101.3 126 79.4
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 5.8e-20 101.3 126 79.4
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 9.9e-20 100.5 125 72.8
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 1.7e-19 99.8 125 78.4
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.7e-19 99.8 125 72.8
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 2.2e-19 99.4 119 79.0
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 4.9e-19 98.2 113 65.5
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 6.4e-19 97.8 125 71.2
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 8.4e-19 97.4 123 75.6
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.1e-18 97.1 117 79.5
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-18 97.1 64 75.0
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.9e-18 96.3 126 73.0
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.4e-18 95.9 125 71.2
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 3.2e-18 95.5 125 76.0
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 5.4e-18 94.7 125 76.8
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 7.1e-18 94.4 124 71.8
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 9.2e-18 94.0 125 71.2
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 9.2e-18 94.0 120 76.7
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 9.2e-18 94.0 117 79.5
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 1.2e-17 93.6 126 72.2
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.6e-17 93.2 118 75.4
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 3.5e-17 92.0 125 70.4
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.0e-16 90.5 64 67.2
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.1e-13 80.5 123 70.7
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 1.1e-13 80.5 128 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.8e-13 79.7 125 71.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 4.0e-13 78.6 63 61.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.6e-12 75.9 117 40.2
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 2.2e-11 72.8 63 60.3
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 8.7e-08 60.8 85 84.7


User provided reference genes

Program Settings