Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.9e-76 288.5 146 100.0
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.8e-68 261.5 145 91.0
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 1.2e-58 229.9 141 83.0
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 7.1e-51 204.1 115 88.7
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 4.2e-35 151.8 112 69.6
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 2.0e-24 116.3 143 46.9
Sopen09g033650 Solanum pennellii HOM05D008157 ORTHO05D009575 8.5e-20 100.9 76 64.5
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 3.2e-19 99.0 156 43.6
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 1.6e-18 96.7 140 41.4
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 1.6e-18 96.7 140 41.4
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 3.9e-17 92.0 120 46.7
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 3.3e-16 89.0 126 42.1
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 4.4e-16 88.6 124 44.4
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 2.2e-15 86.3 138 42.8
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 4.8e-15 85.1 128 43.8
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 4.1e-14 82.0 119 45.4
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 5.9e-13 78.2 119 44.5
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 1.0e-12 77.4 129 41.9
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 8.5e-12 74.3 140 37.1
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.5e-11 73.6 146 39.0
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 2.5e-11 72.8 98 45.9
Nitab4.5_0000194g0020 Nicotiana tabacum HOM05D008157 ORTHO05D009575 4.2e-11 72.0 43 79.1
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 5.5e-11 71.6 136 37.5
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.6e-10 70.1 107 39.3
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 1.6e-10 70.1 134 38.8
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.7e-10 69.3 123 37.4
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 3.6e-10 68.9 141 35.5
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 8.0e-10 67.8 139 36.0
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 1.0e-09 67.4 152 35.5
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.0e-09 67.4 141 34.8
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.8e-09 66.6 141 34.8
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.8e-09 66.6 118 40.7
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 2.3e-09 66.2 118 38.1
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 2.3e-09 66.2 118 39.0
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 3.0e-09 65.9 90 38.9
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 4.0e-09 65.5 142 31.0
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 4.0e-09 65.5 94 40.4
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 8.8e-09 64.3 123 39.0
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 8.8e-09 64.3 140 30.7
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 1.2e-08 63.9 121 38.0
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 2.6e-08 62.8 118 39.8
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.3e-08 62.4 128 35.2
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 4.4e-08 62.0 95 41.1
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 4.4e-08 62.0 116 37.9
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 9.7e-08 60.8 72 51.4
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 9.7e-08 60.8 123 35.0
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 1.3e-07 60.5 143 36.4
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 1.3e-07 60.5 84 46.4
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.3e-07 60.5 126 37.3
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.7e-07 60.1 140 32.1
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.2e-07 59.7 72 50.0
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 2.8e-07 59.3 129 34.9
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 4.8e-07 58.5 124 36.3
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 6.3e-07 58.2 122 36.1
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 1.1e-06 57.4 101 37.6
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.4e-06 57.0 90 41.1
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.8e-06 56.6 149 32.2
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 7.0e-06 54.7 97 41.2
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 7.0e-06 54.7 98 40.8


User provided reference genes

Program Settings