Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.5e-163 579.3 274 100.0
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 2.2e-162 575.5 274 98.9
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 6.9e-156 553.9 274 94.5
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 4.2e-153 544.7 276 93.1
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 7.1e-153 543.9 276 92.8
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 6.7e-151 537.3 276 92.4
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 1.8e-140 502.7 276 89.5
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 3.9e-135 485.0 268 83.6
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 2.8e-133 478.8 268 84.3
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 1.4e-132 476.5 256 86.7
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.8e-132 476.1 264 83.7
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 4.1e-132 474.9 264 83.7
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 3.4e-131 471.9 274 81.0
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 7.7e-131 470.7 274 79.9
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 7.7e-131 470.7 267 83.1
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 2.9e-130 468.8 267 83.1
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 8.5e-130 467.2 266 80.8
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 7.2e-129 464.2 261 82.4
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 2.1e-128 462.6 265 82.3
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 4.6e-128 461.5 266 81.6
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 1.8e-127 459.5 274 78.1
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 3.0e-127 458.8 266 82.7
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.1e-126 456.8 272 80.1
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.5e-126 456.4 263 81.7
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 1.3e-125 453.4 263 80.6
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.2e-125 452.6 264 81.4
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 2.8e-125 452.2 270 81.1
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.8e-125 451.4 262 79.4
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 4.8e-125 451.4 263 82.5
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 1.1e-124 450.3 272 80.5
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.4e-124 449.9 260 80.4
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 2.4e-124 449.1 268 80.2
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 5.3e-124 448.0 267 79.0
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 6.9e-124 447.6 259 81.9
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 9.1e-124 447.2 275 80.0
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 1.5e-123 446.4 262 80.2
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.6e-123 445.7 264 78.8
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 2.6e-123 445.7 267 78.3
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 5.9e-123 444.5 258 80.6
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 5.9e-123 444.5 262 79.8
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 5.9e-123 444.5 275 75.6
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 7.7e-123 444.1 265 78.5
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 1.3e-122 443.4 263 77.2
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.7e-122 443.0 259 81.1
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 2.2e-122 442.6 260 78.5
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 5.0e-122 441.4 274 78.1
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 8.5e-122 440.7 263 78.7
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 1.1e-121 440.3 260 78.5
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 1.1e-121 440.3 260 78.5
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 2.5e-121 439.1 263 78.7
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 2.5e-121 439.1 254 79.9
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 4.2e-121 438.3 263 76.8
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 4.2e-121 438.3 275 76.7
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 4.2e-121 438.3 260 79.2
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.2e-120 436.8 250 80.4
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.1e-120 436.0 255 79.2
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 2.1e-120 436.0 260 78.8
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.3e-119 432.6 255 79.6
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 3.0e-119 432.2 265 74.3
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 8.8e-119 430.6 254 78.7
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 8.8e-119 430.6 278 76.6
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 1.1e-118 430.3 265 74.0
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 1.1e-118 430.3 278 76.6
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 1.1e-118 430.3 262 76.0
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.3e-118 428.7 258 79.1
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 3.3e-118 428.7 260 74.6
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.7e-118 427.9 258 79.1
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.7e-118 427.9 278 76.3
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 2.8e-117 425.6 291 71.1
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 6.3e-117 424.5 260 74.6
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 1.1e-116 423.7 259 79.9
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 1.4e-116 423.3 256 75.0
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 1.8e-116 422.9 269 74.7
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 4.1e-116 421.8 274 74.5
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 4.1e-116 421.8 274 74.5
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 4.1e-116 421.8 261 77.4
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 5.3e-116 421.4 274 74.1
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 5.3e-116 421.4 278 72.7
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 9.1e-116 420.6 274 74.1
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 9.1e-116 420.6 250 78.8
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 1.2e-115 420.2 272 73.5
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 1.2e-115 420.2 273 74.0
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 2.6e-115 419.1 263 74.5
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 5.9e-115 417.9 248 81.5
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.0e-114 417.2 278 72.3
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 1.3e-114 416.8 268 72.4
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.9e-114 415.6 248 78.2
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 3.8e-114 415.2 272 73.5
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 6.5e-114 414.5 274 73.0
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 6.5e-114 414.5 288 68.8
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 1.1e-113 413.7 272 73.2
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 2.5e-113 412.5 269 72.9
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.2e-113 412.1 286 69.2
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 3.2e-113 412.1 258 76.0
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 4.2e-113 411.8 267 71.9
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 2.1e-112 409.5 272 72.8
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 2.1e-112 409.5 275 70.9
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 1.0e-111 407.1 274 70.1
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.8e-111 406.4 259 72.6
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 5.2e-111 404.8 255 74.1
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 1.2e-110 403.7 268 73.5
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 3.3e-110 402.1 229 81.2
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 1.7e-109 399.8 274 71.2
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 6.3e-109 397.9 216 83.3
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.2e-107 393.7 210 84.8
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 3.5e-107 392.1 295 66.8
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 4.5e-107 391.7 242 75.2
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 5.9e-107 391.3 299 64.2
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 2.1e-104 382.9 232 72.8
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 1.4e-103 380.2 277 68.2
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 1.4e-100 370.2 228 74.6
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 1.4e-100 370.2 232 70.3
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 2.7e-99 365.9 228 69.7
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 3.8e-98 362.1 222 77.0
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 5.0e-98 361.7 213 78.9
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.1e-97 360.5 243 65.0
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 1.5e-97 360.1 245 66.5
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 3.0e-95 352.4 219 70.3
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 5.7e-94 348.2 223 67.7
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 2.7e-91 339.3 264 64.4
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.5e-91 339.0 289 59.2
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 2.5e-89 332.8 193 78.2
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.0e-87 325.9 335 52.5
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 8.3e-85 317.8 169 85.2
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.8e-84 316.6 233 66.5
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 2.0e-83 313.2 277 61.4
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.7e-82 310.1 165 84.2
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 1.1e-79 300.8 221 58.8
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 4.1e-76 288.9 199 64.3
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 9.5e-73 277.7 163 81.0
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 7.1e-68 261.5 163 75.5
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 4.6e-67 258.8 153 77.8
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 6.8e-63 245.0 139 80.6
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 3.8e-61 239.2 200 62.0
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 7.8e-59 231.5 213 57.3
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.0e-50 203.0 121 76.9
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 5.3e-47 192.2 126 73.8
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 6.2e-32 142.1 105 68.6
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 3.1e-31 139.8 86 77.9
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 8.7e-26 121.7 72 79.2
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 8.7e-26 121.7 80 71.2
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.4e-23 114.4 69 71.0
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 4.1e-23 112.8 64 81.2
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.5e-22 110.9 65 69.2
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 1.7e-21 107.5 53 86.8
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 1.8e-18 97.4 89 56.2
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 3.3e-17 93.2 81 58.0
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 2.6e-14 83.6 89 52.8
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 6.5e-13 79.0 52 71.2
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 2.1e-11 73.9 52 67.3
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 2.7e-11 73.6 54 66.7
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 4.7e-11 72.8 58 58.6
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 7.9e-11 72.0 54 63.0
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 3.0e-10 70.1 66 56.1
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 6.7e-10 68.9 44 70.5


User provided reference genes

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