Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007336g0010 Nicotiana tabacum HOM05D012586 ORTHO05D012196 7.7e-96 354.0 202 100.0
Nitab4.5_0003374g0020 Nicotiana tabacum HOM05D012586 ORTHO05D012196 6.1e-77 291.2 204 85.8
Solyc04g074770.2 Solanum lycopersicum HOM05D012586 ORTHO05D012196 2.1e-56 223.0 202 72.3
PGSC0003DMG400030842 Solanum tuberosum HOM05D012586 ORTHO05D012196 2.3e-52 209.5 184 72.8
Peaxi162Scf00139g00016 Petunia axillaris HOM05D012586 ORTHO05D012196 2.9e-34 149.4 213 50.2
Oeu024506.2 Olea europaea HOM05D012586 ORTHO05D012196 2.1e-21 106.7 143 60.1
MSTRG.25558 Avicennia marina HOM05D012586 ORTHO05D012196 2.8e-21 106.3 142 63.4
Oeu041264.1 Olea europaea HOM05D012586 ORTHO05D012196 1.8e-15 87.0 125 56.8
SGA_v2.0_scaffold37G14856 Striga asiatica HOM05D012586 ORTHO05D012196 4.3e-14 82.4 126 60.3
Migut.E00997 Erythranthe guttata HOM05D012586 ORTHO05D012196 1.3e-13 80.9 140 55.0
Migut.E01141 Erythranthe guttata HOM05D012586 ORTHO05D012196 1.1e-12 77.8 194 44.3
Migut.A00852 Erythranthe guttata HOM05D012586 ORTHO05D012196 1.8e-12 77.0 153 47.7
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.4e-12 76.6 195 43.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.6e-11 73.2 200 40.0
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.6e-11 73.2 176 43.2
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.0e-10 71.2 185 41.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.8e-10 69.3 179 43.0
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.5e-10 68.6 163 39.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 1.9e-09 67.0 189 40.2
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.5e-09 66.6 189 41.3
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.5e-09 65.5 163 38.7
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 9.3e-09 64.7 180 37.8
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 9.3e-09 64.7 111 53.2
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.6e-08 63.9 133 42.9
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.1e-08 63.5 125 47.2
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.7e-08 63.2 169 43.8
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.7e-08 63.2 179 39.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.7e-08 63.2 114 52.6
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 4.6e-08 62.4 128 43.8
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 4.6e-08 62.4 208 33.2
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.9e-08 61.6 200 37.5
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 7.9e-08 61.6 204 34.3
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.0e-07 61.2 194 36.6
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.9e-07 59.3 201 36.8
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.1e-07 58.9 200 34.0
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 1.1e-06 57.8 117 47.0
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-06 57.8 117 47.0
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.5e-06 57.4 174 37.4
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 2.5e-06 56.6 116 42.2
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 2.5e-06 56.6 107 47.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 3.3e-06 56.2 127 44.1
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 5.7e-06 55.5 107 32.7
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.4e-06 55.1 132 40.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 9.7e-06 54.7 134 44.8


User provided reference genes

Program Settings