Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.8e-134 482.6 248 100.0
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 6.7e-126 454.1 252 94.4
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 6.2e-79 298.1 263 67.7
Sopen02g023590 Solanum pennellii HOM05D004441 ORTHO05D003109 1.3e-73 280.4 263 64.6
PGSC0003DMG400022372 Solanum tuberosum HOM05D004441 ORTHO05D003109 2.1e-71 273.1 262 64.1
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 5.1e-57 225.3 261 61.3
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 2.8e-39 166.4 286 45.1
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 1.1e-38 164.5 270 47.4
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 1.1e-38 164.5 270 47.4
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 1.3e-36 157.5 262 50.8
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 3.5e-34 149.4 287 46.7
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 3.5e-34 149.4 287 46.7
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 3.5e-34 149.4 289 44.3
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 1.3e-33 147.5 286 46.9
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 3.7e-31 139.4 284 43.3
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 8.2e-31 138.3 292 41.4
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 5.8e-29 132.1 269 43.1
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.3e-28 131.0 279 43.0
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 1.7e-28 130.6 282 42.9
SGA_v2.0_scaffold100G29660 Striga asiatica HOM05D004441 ORTHO05D003109 2.9e-28 129.8 256 42.6
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 5.5e-27 125.6 274 42.3
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 9.3e-27 124.8 327 39.8
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 1.2e-26 124.4 280 41.8
Hma1.2p1_0835F.1_g225850 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.1e-26 123.6 259 42.9
Hma1.2p1_0835F.1_g225855 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.1e-26 123.6 259 42.9
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 4.6e-26 122.5 254 42.1
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 6.1e-26 122.1 289 41.9
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 1.1e-24 117.9 281 39.5
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 1.1e-24 117.9 316 37.7
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 1.9e-24 117.1 289 40.5
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 5.7e-24 115.5 314 38.5
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 7.4e-24 115.2 324 37.7
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 9.7e-24 114.8 317 37.5
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 9.7e-24 114.8 292 39.7
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 1.3e-23 114.4 288 42.4
SGA_v2.0_scaffold22G09746 Striga asiatica HOM05D004441 ORTHO05D003109 2.2e-23 113.6 249 40.6
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 2.8e-23 113.2 314 38.2
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.8e-22 110.5 314 36.9
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 3.1e-22 109.8 305 37.7
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 9.0e-22 108.2 311 36.3
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 9.0e-22 108.2 284 40.1
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 1.5e-21 107.5 271 39.9
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 5.9e-21 105.5 329 37.7
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 1.3e-20 104.4 300 37.3
Actinidia05598 Actinidia chinensis HOM05D004441 ORTHO05D003109 1.7e-20 104.0 259 40.5
Nitab4.5_0001833g0010 Nicotiana tabacum HOM05D021131 ORTHO05D022971 8.5e-20 101.7 331 36.3
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.1e-19 101.3 295 37.3
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.1e-19 101.3 298 37.2
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 1.1e-19 101.3 279 39.4
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.9e-19 100.5 296 37.5
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.9e-19 100.5 296 37.5
Lsat_1_v5_gn_4_55461 Lactuca sativa HOM05D004441 ORTHO05D003109 3.2e-19 99.8 286 39.5
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 3.2e-19 99.8 330 37.9
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 4.2e-19 99.4 296 37.2
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 9.4e-19 98.2 302 37.4
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 1.6e-18 97.4 308 39.9
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.1e-18 97.1 300 37.3
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 2.7e-18 96.7 302 37.1
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 7.9e-18 95.1 192 45.3
PGSC0003DMG400005055 Solanum tuberosum HOM05D021131 ORTHO05D022971 7.9e-18 95.1 108 58.3
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 1.4e-17 94.4 328 35.4
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 5.1e-17 92.4 299 36.5
CsaV3_1G011910 Cucumis sativus L. HOM05D004441 ORTHO05D003109 5.1e-17 92.4 277 39.0
ECA236G4168 Erigeron canadensis HOM05D004441 ORTHO05D003109 6.7e-17 92.0 283 38.2
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 1.5e-16 90.9 286 37.1
Nitab4.5_0008104g0020 Nicotiana tabacum HOM05D021131 ORTHO05D022971 3.3e-16 89.7 104 56.7
Glyma.13G184100 Glycine max HOM05D004441 ORTHO05D003109 9.7e-16 88.2 270 35.6
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 9.7e-16 88.2 268 38.4
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.3e-15 87.8 197 43.7
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 1.7e-15 87.4 267 34.1
Solyc03g006600.1 Solanum lycopersicum HOM05D021131 ORTHO05D022971 3.7e-15 86.3 97 58.8
Sopen03g002610 Solanum pennellii HOM05D021131 ORTHO05D022971 3.7e-15 86.3 97 58.8
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 4.8e-15 85.9 322 33.9
Lalb_Chr20g0122111 Lupinus albus HOM05D004441 ORTHO05D003109 6.3e-15 85.5 297 35.7
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 8.2e-15 85.1 300 37.3
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.1e-14 84.7 260 37.3
Aqoxy4G01294 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.8e-14 84.0 254 38.2
Eucgr.D00694 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.8e-14 84.0 306 35.3
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 2.4e-14 83.6 309 36.9
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 2.4e-14 83.6 307 34.9
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 2.4e-14 83.6 208 39.9
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 2.4e-14 83.6 284 38.0
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 3.1e-14 83.2 336 33.3
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 4.1e-14 82.8 283 39.2
Medtr4g089190 Medicago truncatula HOM05D004441 ORTHO05D003109 4.1e-14 82.8 268 36.2
Phvul.002G224300 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 5.3e-14 82.4 275 36.7
VMungo0251G2507 Vigna mungo HOM05D004441 ORTHO05D003109 5.3e-14 82.4 281 34.9
Nn1g06687 Nelumbo nucifera HOM05D004441 ORTHO05D003109 6.9e-14 82.0 244 37.3
ECA234G2831 Erigeron canadensis HOM05D004441 ORTHO05D003109 9.1e-14 81.6 285 36.5
Ah.09g235850 Amaranthus hybridus HOM05D004441 ORTHO05D003109 1.2e-13 81.3 300 35.0
Lalb_Chr18g0059831 Lupinus albus HOM05D004441 ORTHO05D003109 3.4e-13 79.7 290 34.1
Migut.H01500 Erythranthe guttata HOM05D004441 ORTHO05D003109 5.9e-13 79.0 109 55.0
Haze_06542 Corylus avellana HOM05D004441 ORTHO05D003109 7.7e-13 78.6 304 33.9
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 7.7e-13 78.6 299 34.1
Cfa000385 Carpinus fangiana HOM05D004441 ORTHO05D003109 1.0e-12 78.2 306 34.6
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 1.0e-12 78.2 275 35.6
BcaB04g20321 Brassica carinata HOM05D004441 ORTHO05D003109 2.2e-12 77.0 261 36.4
BcaC09g49327 Brassica carinata HOM05D004441 ORTHO05D003109 2.9e-12 76.6 262 35.5
C01p37890 Brassica napus HOM05D004441 ORTHO05D003109 2.9e-12 76.6 262 35.5
BolC1t03749H Brassica oleracea HOM05D004441 ORTHO05D003109 2.9e-12 76.6 262 35.5
BraA01t03127Z Brassica rapa HOM05D004441 ORTHO05D003109 2.9e-12 76.6 262 35.5
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 2.9e-12 76.6 327 31.5
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 3.8e-12 76.3 285 35.1
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 3.8e-12 76.3 285 35.1
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 3.8e-12 76.3 300 35.3
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.8e-12 76.3 306 37.3
Cpa.g.sc27.93 Carica papaya HOM05D004441 ORTHO05D003109 1.1e-11 74.7 316 32.9
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 1.4e-11 74.3 239 38.9
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 2.5e-11 73.6 282 34.0
CDE04G0293 Ceratophyllum demersum HOM05D004919 ORTHO05D005994 3.2e-11 73.2 267 35.6
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 4.2e-11 72.8 325 32.9
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 5.5e-11 72.4 286 32.9
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 7.2e-11 72.0 339 31.3
CARHR011330 Cardamine hirsuta HOM05D004441 ORTHO05D003109 7.2e-11 72.0 283 33.6
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 7.2e-11 72.0 285 33.7
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 9.4e-11 71.6 302 31.5
A01p29970 Brassica napus HOM05D004441 ORTHO05D003109 1.2e-10 71.2 262 34.7
AL2G15180 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 2.7e-10 70.1 264 36.7
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 2.7e-10 70.1 251 37.5
THA.LOC104809557 Tarenaya hassleriana HOM05D004441 ORTHO05D003109 2.7e-10 70.1 303 35.0
AT1G61170 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 3.6e-10 69.7 264 35.6
Carub.0002s0400 Capsella rubella HOM05D004441 ORTHO05D003109 3.6e-10 69.7 268 35.1
Aa31LG1G3780 Aethionema arabicum HOM05D004441 ORTHO05D003109 6.1e-10 68.9 285 33.3
A03p66730 Brassica napus HOM05D004441 ORTHO05D003109 6.1e-10 68.9 262 35.5
BraA01t02809Z Brassica rapa HOM05D004441 ORTHO05D003109 6.1e-10 68.9 262 35.5
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 6.1e-10 68.9 306 36.9
Psat0s2678g0120 Pisum sativum HOM05D004441 ORTHO05D003109 7.9e-10 68.6 276 34.1
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.0e-09 68.2 267 34.8
Sed0025630 Sechium edule HOM05D004441 ORTHO05D003109 1.0e-09 68.2 269 39.0
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.0e-09 68.2 298 33.2
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.0e-09 68.2 299 33.1
BcaC02g10584 Brassica carinata HOM05D004441 ORTHO05D003109 1.4e-09 67.8 260 35.0
C04p27200 Brassica napus HOM05D004441 ORTHO05D003109 1.4e-09 67.8 260 35.0
BolC4t24251H Brassica oleracea HOM05D004441 ORTHO05D003109 1.4e-09 67.8 260 35.0
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 1.4e-09 67.8 286 32.5
Sp2g03290 Schrenkiella parvula HOM05D004441 ORTHO05D003109 1.4e-09 67.8 265 34.0
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 1.4e-09 67.8 299 32.8
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 1.8e-09 67.4 286 35.0
Atru.chr10.1971 Acer truncatum HOM05D004441 ORTHO05D003109 2.3e-09 67.0 300 32.3
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 2.3e-09 67.0 311 33.4
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 3.0e-09 66.6 267 36.7
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 3.0e-09 66.6 267 36.7
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 6.7e-09 65.5 281 32.0
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 6.7e-09 65.5 256 36.7
Peaxi162Scf00137g00062 Petunia axillaris HOM05D021131 ORTHO05D022971 1.5e-08 64.3 246 35.8
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 2.0e-08 63.9 311 32.2
Glyma.13G299800 Glycine max HOM05D010177 ORTHO05D003109 2.6e-08 63.5 270 33.0
Manes.16G023200 Manihot esculenta HOM05D004441 ORTHO05D003109 5.7e-08 62.4 321 31.8
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 9.7e-08 61.6 259 34.0
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 1.3e-07 61.2 279 33.3
PSO541G1557 Papaver somniferum HOM05D004441 ORTHO05D003109 1.7e-07 60.8 332 30.1
CARHR051480 Cardamine hirsuta HOM05D004441 ORTHO05D003109 2.8e-07 60.1 253 34.4
PGR042G3342 Punica granatum HOM05D004441 ORTHO05D003109 2.8e-07 60.1 278 33.8
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 3.7e-07 59.7 265 36.2
Manes.12G087900 Manihot esculenta HOM05D010652 ORTHO05D003109 4.8e-07 59.3 296 31.1
Aa31LG2G9430 Aethionema arabicum HOM05D004441 ORTHO05D003109 6.3e-07 58.9 234 35.0
AL1G22120 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 8.2e-07 58.5 180 38.3
Carub.0001s1070 Capsella rubella HOM05D004441 ORTHO05D003109 1.4e-06 57.8 192 34.9
Sp1g09810 Schrenkiella parvula HOM05D004441 ORTHO05D003109 1.4e-06 57.8 287 33.1
Sabra04G0022600 Salix brachista HOM05D004441 ORTHO05D003109 2.4e-06 57.0 316 31.3
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 3.1e-06 56.6 273 33.3
Potri.005G086300 Populus trichocarpa HOM05D010652 ORTHO05D003109 5.3e-06 55.8 241 35.7
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 7.0e-06 55.5 278 32.4
A06p07830 Brassica napus HOM05D004441 ORTHO05D003109 9.1e-06 55.1 300 31.3


User provided reference genes

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