Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 5.8e-56 220.7 115 100.0
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 6.6e-44 180.6 134 74.6
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 8.1e-42 173.7 133 72.9
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 1.5e-19 99.8 131 45.0
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 2.2e-18 95.9 131 43.5
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 3.7e-18 95.1 131 42.7
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 3.7e-18 95.1 131 42.7
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 6.3e-18 94.4 131 42.7
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.2e-18 94.0 91 56.0
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.8e-17 92.8 131 42.0
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 1.8e-17 92.8 131 42.7
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.1e-17 91.7 97 50.5
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 6.9e-17 90.9 98 49.0
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 6.9e-17 90.9 97 50.5
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.0e-16 89.4 100 47.0
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.6e-16 89.0 97 49.5
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.4e-16 88.6 97 50.5
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 7.7e-16 87.4 97 49.5
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-15 86.7 109 45.9
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-15 86.7 109 45.9
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-15 86.7 109 45.9
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 1.3e-15 86.7 97 47.4
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.9e-15 85.5 97 48.5
CAN.G782.17 Capsicum annuum HOM05D007832 ORTHO05D009598 5.0e-15 84.7 96 45.8
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 5.0e-15 84.7 109 45.0
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.5e-15 84.3 109 45.0
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 2.5e-14 82.4 109 44.0
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 3.2e-14 82.0 92 46.7
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.2e-14 81.6 130 40.0
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 1.2e-13 80.1 109 44.0
Nitab4.5_0003358g0030 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.7e-13 79.0 101 42.6
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 2.7e-13 79.0 109 43.1
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 2.3e-12 75.9 125 39.2
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 2.3e-12 75.9 109 43.1
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 5.1e-12 74.7 99 43.4
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 5.1e-12 74.7 109 42.2
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 6.7e-12 74.3 91 46.2
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.8e-12 73.9 133 41.4
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 1.1e-11 73.6 110 42.7
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.5e-11 72.4 99 48.5
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 4.3e-11 71.6 101 43.6
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 4.3e-11 71.6 101 42.6
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 4.3e-11 71.6 110 41.8
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 5.7e-11 71.2 109 41.3
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 7.4e-11 70.9 98 44.9
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.7e-10 69.7 96 42.7
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 2.2e-10 69.3 93 41.9
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 8.2e-10 67.4 125 35.2
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.8e-09 66.2 101 39.6
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 2.4e-09 65.9 76 48.7
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.4e-09 65.9 115 37.4
Peaxi162Scf00380g00621 Petunia axillaris HOM05D000011 ORTHO05D000018 4.1e-09 65.1 80 46.2
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 4.1e-09 65.1 79 44.3
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.3e-09 64.7 94 39.4
MD04G1186300 Malus domestica HOM05D000307 ORTHO05D000166 1.5e-08 63.2 99 34.3
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.5e-08 63.2 70 47.1
Duzib106G1547 Durio zibethinus HOM05D000307 ORTHO05D000166 2.0e-08 62.8 100 33.0
AT3G05860 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 2.6e-08 62.4 106 34.0
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 2.6e-08 62.4 85 41.2
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 2.6e-08 62.4 94 36.2
Dinv12353 Davidia involucrata HOM05D000307 ORTHO05D009598 4.5e-08 61.6 91 31.9
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.5e-08 61.6 103 37.9
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.7e-07 59.7 97 37.1
Gohir.A11G315633 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.2e-07 59.3 95 33.7
Oeu028858.1 Olea europaea HOM05D000307 ORTHO05D009598 2.9e-07 58.9 99 35.4
Duzib128G0455 Durio zibethinus HOM05D000307 ORTHO05D000166 3.8e-07 58.5 114 28.9
Cpa.g.sc117.24 Carica papaya HOM05D000307 ORTHO05D000166 5.0e-07 58.2 111 28.8
Gorai.011G177600 Gossypium raimondii HOM05D000307 ORTHO05D000166 5.0e-07 58.2 98 31.6
Gorai.007G363700 Gossypium raimondii HOM05D000307 ORTHO05D000166 1.1e-06 57.0 97 32.0
Gohir.D11G332700 Gossypium hirsutum HOM05D000307 ORTHO05D000166 1.4e-06 56.6 97 32.0
MD12G1199600 Malus domestica HOM05D000307 ORTHO05D000166 1.4e-06 56.6 101 31.7
Thecc.05G107100 Theobroma cacao HOM05D000307 ORTHO05D000166 1.4e-06 56.6 114 28.9
Carub.0003s0522 Capsella rubella HOM05D000307 ORTHO05D000166 1.9e-06 56.2 106 29.2
Atru.chr7.769 Acer truncatum HOM05D000307 ORTHO05D000166 2.5e-06 55.8 98 26.5
Atru.chr7.788 Acer truncatum HOM05D000307 ORTHO05D000166 2.5e-06 55.8 98 26.5
BcaC05g30082 Brassica carinata HOM05D000307 ORTHO05D000166 2.5e-06 55.8 106 31.1
A05p42190 Brassica napus HOM05D000307 ORTHO05D000166 2.5e-06 55.8 106 31.1
C05p61410 Brassica napus HOM05D000307 ORTHO05D000166 2.5e-06 55.8 106 31.1
BolC5t34799H Brassica oleracea HOM05D000307 ORTHO05D000166 2.5e-06 55.8 106 31.1
BraA05t22938Z Brassica rapa HOM05D000307 ORTHO05D000166 2.5e-06 55.8 106 31.1
Gohir.D10G158100 Gossypium hirsutum HOM05D000307 ORTHO05D000166 3.2e-06 55.5 98 30.6
Dinv24977 Davidia involucrata HOM05D000954 ORTHO05D000822 4.2e-06 55.1 93 33.3
CARHR119080 Cardamine hirsuta HOM05D000307 ORTHO05D000166 5.5e-06 54.7 112 30.4
Thhalv10021183m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 5.5e-06 54.7 87 31.0
QL04p024253 Quercus lobata HOM05D000307 ORTHO05D000166 7.2e-06 54.3 115 30.4
Atru.chr12.1732 Acer truncatum HOM05D000307 ORTHO05D000166 9.4e-06 53.9 107 32.7


User provided reference genes

Program Settings