Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007260g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 8.8e-72 273.9 176 100.0
Nitab4.5_0003558g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 2.7e-52 209.1 170 82.9
Peaxi162Scf00984g00117 Petunia axillaris HOM05D000536 ORTHO05D001213 9.2e-45 184.1 165 69.7
PGSC0003DMG400020679 Solanum tuberosum HOM05D000536 ORTHO05D001213 2.8e-41 172.6 179 59.8
Sopen12g002580 Solanum pennellii HOM05D000536 ORTHO05D001213 2.6e-39 166.0 174 58.6
Solyc12g006630.2 Solanum lycopersicum HOM05D000536 ORTHO05D001213 3.7e-38 162.2 174 57.5
Dinv36543 Davidia involucrata HOM05D000536 ORTHO05D001213 1.6e-28 130.2 159 53.5
CSS0018342 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 3.9e-27 125.6 171 60.2
CSS0043910 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 1.9e-26 123.2 171 60.2
vmacro20599 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 2.8e-25 119.4 167 47.9
Cc06_g08740 Coffea canephora HOM05D000536 ORTHO05D001213 1.1e-24 117.5 166 48.8
Rhsim01G0076200 Rhododendron simsii HOM05D000536 ORTHO05D001213 1.8e-24 116.7 164 47.0
Rhsim01G0076300 Rhododendron simsii HOM05D000536 ORTHO05D001213 1.8e-24 116.7 164 47.0
TAR383G0639 Trochodendron aralioides HOM05D000536 ORTHO05D001213 5.8e-23 111.7 159 45.9
GSVIVG01015506001 Vitis vinifera HOM05D000536 ORTHO05D001213 6.4e-22 108.2 164 48.8
Cfa003351 Carpinus fangiana HOM05D000536 ORTHO05D001213 1.4e-21 107.1 167 45.5
TAR625G1232 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.4e-21 107.1 159 44.7
CiPaw.03G242400 Carya illinoinensis HOM05D000536 ORTHO05D001213 2.4e-21 106.3 160 45.6
Lj7A631G23 Lonicera japonica HOM05D000536 ORTHO05D001213 1.6e-20 103.6 162 44.4
Lsat_1_v5_gn_8_58960 Lactuca sativa HOM05D000536 ORTHO05D001213 1.0e-19 100.9 160 42.5
Migut.K00474 Erythranthe guttata HOM05D000536 ORTHO05D001213 1.3e-19 100.5 168 41.1
QL02p087871 Quercus lobata HOM05D000536 ORTHO05D001213 2.3e-19 99.8 165 44.8
CSS0008171 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 3.0e-19 99.4 163 42.9
CAN.G377.8 Capsicum annuum HOM05D000536 ORTHO05D001213 6.6e-19 98.2 51 94.1
Oeu034111.1 Olea europaea HOM05D000536 ORTHO05D001213 6.6e-19 98.2 146 54.1
Aqoxy7G02114 Aquilegia oxysepala HOM05D000536 ORTHO05D001213 1.1e-18 97.4 160 40.6
ECA240G2050 Erigeron canadensis HOM05D000536 ORTHO05D001213 4.3e-18 95.5 178 37.6
DCAR_017824 Daucus carota HOM05D000536 ORTHO05D001213 1.3e-17 94.0 166 50.6
DCAR_017825 Daucus carota HOM05D000536 ORTHO05D001213 1.3e-17 94.0 166 50.6
Hma1.2p1_0018F.1_g012620 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 1.3e-17 94.0 51 88.2
Hma1.2p1_0665F.1_g199100 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 1.6e-17 93.6 51 88.2
Nn8g39397 Nelumbo nucifera HOM05D000536 ORTHO05D001213 2.1e-17 93.2 162 39.5
Eucgr.C04183 Eucalyptus grandis HOM05D000536 ORTHO05D001213 2.4e-16 89.7 51 82.4
Duzib168G1357 Durio zibethinus HOM05D000536 ORTHO05D001213 3.1e-16 89.4 51 82.4
Thecc.09G123600 Theobroma cacao HOM05D000536 ORTHO05D001213 3.1e-16 89.4 51 82.4
PGR102G3259 Punica granatum HOM05D000536 ORTHO05D001213 4.0e-16 89.0 169 42.6
TAR626G0923 Trochodendron aralioides HOM05D000536 ORTHO05D001213 4.0e-16 89.0 137 43.1
Haze_25610 Corylus avellana HOM05D000536 ORTHO05D001213 5.3e-16 88.6 156 42.9
TWI34G0627 Tripterygium wilfordii HOM05D000536 ORTHO05D001213 5.3e-16 88.6 51 84.3
Duzib150G1540 Durio zibethinus HOM05D000536 ORTHO05D001213 1.5e-15 87.0 51 78.4
FvH4_1g03560 Fragaria vesca HOM05D000536 ORTHO05D001213 2.6e-15 86.3 162 39.5
Ciclev10009401m.g Citrus clementina HOM05D000536 ORTHO05D001213 3.4e-15 85.9 66 63.6
COL.COLO4_05775 Corchorus olitorius HOM05D000536 ORTHO05D001213 3.4e-15 85.9 56 71.4
FAN28G0052 Fragaria x ananassa HOM05D000536 ORTHO05D001213 3.4e-15 85.9 172 39.0
HanXRQChr06g0180261 Helianthus annuus HOM05D000536 ORTHO05D001213 4.5e-15 85.5 161 39.1
Atru.chr7.1210 Acer truncatum HOM05D000536 ORTHO05D001213 7.6e-15 84.7 162 38.9
MD02G1034900 Malus domestica HOM05D000536 ORTHO05D001213 7.6e-15 84.7 51 78.4
FAN26G0898 Fragaria x ananassa HOM05D000536 ORTHO05D001213 9.9e-15 84.3 51 78.4
SalBow1G6056 Salvia bowleyana HOM05D000536 ORTHO05D001213 9.9e-15 84.3 53 69.8
FAN19G2088 Fragaria x ananassa HOM05D000536 ORTHO05D001213 1.3e-14 84.0 161 38.5
Lsat_1_v5_gn_7_45721 Lactuca sativa HOM05D000536 ORTHO05D001213 1.3e-14 84.0 188 43.1
MD00G1106900 Malus domestica HOM05D000536 ORTHO05D001213 1.3e-14 84.0 51 76.5
Nn2g11972 Nelumbo nucifera HOM05D000536 ORTHO05D001213 1.3e-14 84.0 51 74.5
Prupe.7G240100 Prunus persica HOM05D000536 ORTHO05D001213 1.3e-14 84.0 51 78.4
Gohir.D05G018400 Gossypium hirsutum HOM05D000536 ORTHO05D001213 1.7e-14 83.6 51 74.5
Gorai.009G018800 Gossypium raimondii HOM05D000536 ORTHO05D001213 1.7e-14 83.6 51 74.5
FAN23G0966 Fragaria x ananassa HOM05D000536 ORTHO05D001213 2.2e-14 83.2 51 76.5
HanXRQChr03g0062531 Helianthus annuus HOM05D000536 ORTHO05D001213 2.2e-14 83.2 176 42.0
Gohir.A05G017500 Gossypium hirsutum HOM05D000536 ORTHO05D001213 2.9e-14 82.8 51 74.5
RcHm_v2.0_Chr2g0089081 Rosa chinensis HOM05D000536 ORTHO05D001213 2.9e-14 82.8 51 76.5
EL10Ac8g18621 Beta vulgaris HOM05D000536 ORTHO05D001213 3.8e-14 82.4 225 33.3
Manes.14G130800 Manihot esculenta HOM05D000536 ORTHO05D001213 6.4e-14 81.6 51 74.5
Hund26491 Selenicereus undatus HOM05D000536 ORTHO05D001213 6.4e-14 81.6 51 74.5
BraA03t10298Z Brassica rapa HOM05D000536 ORTHO05D001213 8.4e-14 81.3 168 35.7
Cpa.g.sc75.54 Carica papaya HOM05D000536 ORTHO05D001213 8.4e-14 81.3 51 74.5
THA.LOC104815103 Tarenaya hassleriana HOM05D000536 ORTHO05D001213 8.4e-14 81.3 66 60.6
ATR1156G077 Amborella trichopoda HOM05D000536 ORTHO05D001213 1.1e-13 80.9 51 74.5
A03p09830 Brassica napus HOM05D000536 ORTHO05D001213 1.1e-13 80.9 168 35.7
Sc18g0000670 Simmondsia chinensis HOM05D000536 ORTHO05D001213 1.4e-13 80.5 199 34.2
CANSAT11G2354 Cannabis sativa HOM05D000536 ORTHO05D001213 2.4e-13 79.7 51 72.5
MBI04_g07633_MAGBIO Magnolia biondii HOM05D000536 ORTHO05D001213 2.4e-13 79.7 51 74.5
BcaC03g13731 Brassica carinata HOM05D003058 ORTHO05D003464 5.4e-13 78.6 50 70.0
BNapus_Darmor_BZH_scaffold_38p01800 Brassica napus HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 70.0
C03p11410 Brassica napus HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 70.0
BolC2t07014H Brassica oleracea HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 70.0
BraA02t05555Z Brassica rapa HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 70.0
CARHR192720 Cardamine hirsuta HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 72.0
Thhalv10014655m.g Eutrema salsugineum HOM05D000536 ORTHO05D001213 5.4e-13 78.6 169 35.5
Sp6g24300 Schrenkiella parvula HOM05D000536 ORTHO05D001213 5.4e-13 78.6 50 70.0
BcaB01g04803 Brassica carinata HOM05D000536 ORTHO05D001213 7.1e-13 78.2 168 42.9
BolC3t13615H Brassica oleracea HOM05D000536 ORTHO05D001213 7.1e-13 78.2 168 42.9
Lalb_Chr07g0178841 Lupinus albus HOM05D000536 ORTHO05D001213 7.1e-13 78.2 180 40.0
Glyma.13G168300 Glycine max HOM05D000536 ORTHO05D001213 1.2e-12 77.4 48 75.0
Lj4g0020082 Lotus japonicus HOM05D000536 ORTHO05D001213 1.2e-12 77.4 49 75.5
Aa31sc461G10 Aethionema arabicum HOM05D000536 ORTHO05D001213 1.6e-12 77.0 50 70.0
HanXRQChr09g0242341 Helianthus annuus HOM05D000536 ORTHO05D001213 2.1e-12 76.6 186 41.9
Carub.0006s1849 Capsella rubella HOM05D000536 ORTHO05D001213 2.7e-12 76.3 50 68.0
AUR62033482 Chenopodium quinoa HOM05D000536 ORTHO05D001213 2.7e-12 76.3 176 34.7
arahy.Tifrunner.gnm1.ann1.VNPM5I Arachis hypogaea HOM05D000536 ORTHO05D001213 3.5e-12 75.9 50 72.0
AUR62011093 Chenopodium quinoa HOM05D000536 ORTHO05D001213 3.5e-12 75.9 50 70.0
ClCG11G002920 Citrullus lanatus HOM05D000536 ORTHO05D001213 3.5e-12 75.9 171 38.6
TPR.G10718 Trifolium pratense HOM05D000536 ORTHO05D001213 3.5e-12 75.9 194 34.5
arahy.Tifrunner.gnm1.ann1.62CDNH Arachis hypogaea HOM05D000536 ORTHO05D001213 4.6e-12 75.5 50 72.0
Sed0020428 Sechium edule HOM05D000536 ORTHO05D001213 4.6e-12 75.5 51 66.7
A02p06040 Brassica napus HOM05D000536 ORTHO05D001213 7.9e-12 74.7 44 75.0
Medtr4g114060 Medicago truncatula HOM05D000536 ORTHO05D001213 7.9e-12 74.7 190 44.7
AL6G31660 Arabidopsis lyrata HOM05D000536 ORTHO05D001213 1.0e-11 74.3 50 66.0
AT5G20110 Arabidopsis thaliana HOM05D000536 ORTHO05D001213 1.0e-11 74.3 50 66.0
Sed0016505 Sechium edule HOM05D000536 ORTHO05D001213 1.0e-11 74.3 170 35.9
MELO3C004518.2 Cucumis melo HOM05D000536 ORTHO05D001213 1.3e-11 73.9 51 68.6
CsaV3_2G002750 Cucumis sativus L. HOM05D000536 ORTHO05D001213 1.3e-11 73.9 51 68.6
Lalb_Chr12g0197831 Lupinus albus HOM05D000536 ORTHO05D001213 1.8e-11 73.6 43 76.7
PSO170G1145 Papaver somniferum HOM05D000536 ORTHO05D001213 2.3e-11 73.2 47 68.1
PSO455G0146 Papaver somniferum HOM05D000536 ORTHO05D001213 2.3e-11 73.2 47 68.1
Psat4g040840 Pisum sativum HOM05D000536 ORTHO05D001213 3.9e-11 72.4 50 66.0
Glyma.17G116000 Glycine max HOM05D000536 ORTHO05D001213 5.6e-10 68.6 189 34.4
BcaB01g04806 Brassica carinata HOM05D000536 ORTHO05D001213 2.1e-09 66.6 34 85.3
CDE04G2147 Ceratophyllum demersum HOM05D001564 ORTHO05D001439 1.8e-08 63.5 51 56.9
Zm00001eb342300 Zea mays HOM05D000536 ORTHO05D001213 6.9e-08 61.6 51 51.0
Dinv41528 Davidia involucrata HOM05D000536 ORTHO05D029247 2.6e-07 59.7 33 84.8
CSS0038761 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 2.2e-06 56.6 41 65.9
CAN.G628.56 Capsicum annuum HOM05D000536 ORTHO05D001213 2.2e-06 56.6 41 63.4
Ciclev10021550m.g Citrus clementina HOM05D000536 ORTHO05D001213 3.8e-06 55.8 50 52.0
Os01g0555600 Oryza sativa ssp. japonica HOM05D000536 ORTHO05D001213 3.8e-06 55.8 45 53.3
Peaxi162Scf00689g00547 Petunia axillaris HOM05D000536 ORTHO05D001213 3.8e-06 55.8 41 63.4
PGR083G1234 Punica granatum HOM05D000536 ORTHO05D001213 4.9e-06 55.5 41 63.4
PGR083G1936 Punica granatum HOM05D000536 ORTHO05D001213 4.9e-06 55.5 41 63.4
Solyc06g071180.3 Solanum lycopersicum HOM05D000536 ORTHO05D001213 4.9e-06 55.5 41 65.9
vmacro16577 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 4.9e-06 55.5 50 54.0
GSVIVG01008092001 Vitis vinifera HOM05D000536 ORTHO05D001213 4.9e-06 55.5 50 54.0
MSTRG.11412 Avicennia marina HOM05D000536 ORTHO05D001213 6.4e-06 55.1 41 61.0
MSTRG.23068 Avicennia marina HOM05D000536 ORTHO05D001213 6.4e-06 55.1 41 61.0
Duzib205G1168 Durio zibethinus HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 54.0
FvH4_5g15920 Fragaria vesca HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 56.0
FAN04G2468 Fragaria x ananassa HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 56.0
FAN08G1897 Fragaria x ananassa HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 56.0
RcHm_v2.0_Chr7g0180131 Rosa chinensis HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 56.0
Sopen06g027490 Solanum pennellii HOM05D000536 ORTHO05D001213 6.4e-06 55.1 41 63.4
Thecc.K0000600 Theobroma cacao HOM05D000536 ORTHO05D001213 6.4e-06 55.1 50 54.0
TAR371G0401 Trochodendron aralioides HOM05D000536 ORTHO05D001213 6.4e-06 55.1 40 57.5
Duzib084G0493 Durio zibethinus HOM05D000536 ORTHO05D001213 8.4e-06 54.7 50 52.0
MD14G1190400 Malus domestica HOM05D000536 ORTHO05D001213 8.4e-06 54.7 50 54.0
SalBow5G0983 Salvia bowleyana HOM05D000536 ORTHO05D001213 8.4e-06 54.7 41 61.0
PGSC0003DMG400033063 Solanum tuberosum HOM05D000536 ORTHO05D001213 8.4e-06 54.7 41 63.4
SGA_v2.0_scaffold56G20077 Striga asiatica HOM05D000536 ORTHO05D001213 8.4e-06 54.7 41 58.5


User provided reference genes

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