Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007255g0050 Nicotiana tabacum HOM05D008318 ORTHO05D010481 1.2e-62 243.0 124 100.0
CAN.G668.44 Capsicum annuum HOM05D008318 ORTHO05D010481 2.9e-45 185.3 127 74.8
Sopen03g041160 Solanum pennellii HOM05D008318 ORTHO05D010481 9.4e-44 180.3 126 76.2
Solyc03g123380.1 Solanum lycopersicum HOM05D008318 ORTHO05D010481 7.9e-43 177.2 127 76.4
PGSC0003DMG400014028 Solanum tuberosum HOM05D008318 ORTHO05D010481 8.8e-42 173.7 126 76.2
QL05p004216 Quercus lobata HOM05D008318 ORTHO05D010481 1.1e-36 156.8 122 70.5
CiPaw.02G135200 Carya illinoinensis HOM05D008318 ORTHO05D010481 3.6e-35 151.8 118 68.6
COL.COLO4_30750 Corchorus olitorius HOM05D008318 ORTHO05D010481 2.2e-32 142.5 126 62.7
Eucgr.J02810 Eucalyptus grandis HOM05D008318 ORTHO05D010481 3.7e-32 141.7 116 64.7
Potri.001G168400 Populus trichocarpa HOM05D008318 ORTHO05D010481 3.7e-32 141.7 129 62.0
Potri.003G065900 Populus trichocarpa HOM05D008318 ORTHO05D010481 6.3e-32 141.0 127 60.6
Thecc.06G121000 Theobroma cacao HOM05D008318 ORTHO05D010481 6.3e-32 141.0 126 61.9
Oeu011091.1 Olea europaea HOM05D008318 ORTHO05D010481 8.2e-32 140.6 125 62.4
Sabra01G0142200 Salix brachista HOM05D008318 ORTHO05D010481 8.2e-32 140.6 122 66.4
Glyma.07G039500 Glycine max HOM05D008318 ORTHO05D010481 1.8e-31 139.4 113 65.5
FvH4_6g34840 Fragaria vesca HOM05D008318 ORTHO05D010481 2.4e-31 139.0 130 58.5
Haze_16036 Corylus avellana HOM05D008318 ORTHO05D010481 5.3e-31 137.9 111 66.7
RcHm_v2.0_Chr2g0145711 Rosa chinensis HOM05D008318 ORTHO05D010481 5.3e-31 137.9 129 58.1
Sc15g0000380 Simmondsia chinensis HOM05D008318 ORTHO05D010481 7.0e-31 137.5 115 64.3
Manes.11G019700 Manihot esculenta HOM05D008318 ORTHO05D010481 9.1e-31 137.1 130 60.0
Ah.08g216830 Amaranthus hybridus HOM05D008318 ORTHO05D010481 1.2e-30 136.7 127 59.8
Cfa003529 Carpinus fangiana HOM05D008318 ORTHO05D010481 1.2e-30 136.7 115 65.2
Medtr8g020870 Medicago truncatula HOM05D008318 ORTHO05D010481 1.2e-30 136.7 129 58.9
TPR.G36619 Trifolium pratense HOM05D008318 ORTHO05D010481 4.5e-30 134.8 127 58.3
Prupe.3G039900 Prunus persica HOM05D008318 ORTHO05D010481 1.0e-29 133.7 126 61.1
Dinv20430 Davidia involucrata HOM05D008318 ORTHO05D010481 2.2e-29 132.5 119 63.9
Psat4g174720 Pisum sativum HOM05D008318 ORTHO05D010481 2.2e-29 132.5 124 60.5
Rhsim12G0209900 Rhododendron simsii HOM05D008318 ORTHO05D010481 2.2e-29 132.5 126 58.7
VMungo0331G0642 Vigna mungo HOM05D008318 ORTHO05D010481 8.5e-29 130.6 128 56.2
Lj3g0007896 Lotus japonicus HOM05D008318 ORTHO05D010481 1.1e-28 130.2 124 58.9
Ca_23388_v3 Cicer arietinum L. HOM05D008318 ORTHO05D010481 1.5e-28 129.8 129 58.1
Nn8g38638 Nelumbo nucifera HOM05D008318 ORTHO05D010481 3.2e-28 128.6 118 57.6
Actinidia27735 Actinidia chinensis HOM05D008318 ORTHO05D010481 5.5e-28 127.9 99 71.7
MD09G1181800 Malus domestica HOM05D008318 ORTHO05D010481 9.4e-28 127.1 131 55.7
Oeu000415.1 Olea europaea HOM05D008318 ORTHO05D010481 9.4e-28 127.1 107 65.4
TAR383G0433 Trochodendron aralioides HOM05D008318 ORTHO05D010481 1.6e-27 126.3 122 59.8
Actinidia26824 Actinidia chinensis HOM05D008318 ORTHO05D010481 2.1e-27 125.9 99 70.7
MSTRG.10951 Avicennia marina HOM05D008318 ORTHO05D010481 2.1e-27 125.9 121 56.2
Hma1.2p1_0291F.1_g115060 Hydrangea macrophylla HOM05D008318 ORTHO05D010481 2.7e-27 125.6 121 59.5
FAN14G5086 Fragaria x ananassa HOM05D008318 ORTHO05D010481 6.1e-27 124.4 114 59.6
Ciclev10026763m.g Citrus clementina HOM05D008318 ORTHO05D010481 1.8e-26 122.9 129 55.0
FAN09G4084 Fragaria x ananassa HOM05D008318 ORTHO05D010481 1.8e-26 122.9 114 58.8
Lalb_Chr25g0281471 Lupinus albus HOM05D008318 ORTHO05D010481 1.8e-26 122.9 115 60.0
Gohir.D06G150000 Gossypium hirsutum HOM05D008318 ORTHO05D010481 8.8e-26 120.6 118 55.9
Gorai.010G175100 Gossypium raimondii HOM05D008318 ORTHO05D010481 1.1e-25 120.2 116 56.0
Gohir.A06G144300 Gossypium hirsutum HOM05D008318 ORTHO05D010481 2.6e-25 119.0 116 55.2
CsaV3_UNG227960 Cucumis sativus L. HOM05D008318 ORTHO05D010481 2.2e-24 115.9 122 54.9
Aqoxy1G00205 Aquilegia oxysepala HOM05D008318 ORTHO05D010481 2.4e-23 112.5 119 54.6
ClCG07G014110 Citrullus lanatus HOM05D008318 ORTHO05D010481 2.4e-23 112.5 122 54.9
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 3.1e-23 112.1 109 59.6
Phvul.010G129200 Phaseolus vulgaris HOM05D008318 ORTHO05D010481 5.3e-23 111.3 124 50.8
MELO3C025802.2 Cucumis melo HOM05D008318 ORTHO05D010481 9.1e-23 110.5 122 52.5
SGA_v2.0_scaffold71G23850 Striga asiatica HOM05D008318 ORTHO05D010481 9.1e-23 110.5 121 54.5
Actinidia25326 Actinidia chinensis HOM05D008318 ORTHO05D010481 2.0e-22 109.4 96 65.6
Atru.chr1.3996 Acer truncatum HOM05D008318 ORTHO05D010481 3.5e-22 108.6 121 54.5
Sed0008648 Sechium edule HOM05D008318 ORTHO05D010481 3.5e-22 108.6 126 50.8
Lsat_1_v5_gn_4_93140 Lactuca sativa HOM05D008318 ORTHO05D010481 5.0e-21 104.8 113 53.1
DCAR_026413 Daucus carota HOM05D008318 ORTHO05D010481 1.1e-20 103.6 133 50.4
Aa31LG8G1250 Aethionema arabicum HOM05D008318 ORTHO05D010481 2.1e-19 99.4 121 42.1
EL10Ac7g16416 Beta vulgaris HOM05D008318 ORTHO05D010481 1.5e-17 93.2 93 61.3
Manes.04G145300 Manihot esculenta HOM05D008318 ORTHO05D010481 6.1e-11 71.2 74 56.8


User provided reference genes

Program Settings