Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007244g0040 Nicotiana tabacum HOM05D004435 ORTHO05D005103 6.1e-64 247.3 122 100.0
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 1.8e-39 166.0 121 71.9
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 2.3e-39 165.6 122 71.3
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 1.2e-38 163.3 121 72.7
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 2.0e-38 162.5 122 70.5
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 3.0e-26 122.1 121 53.7
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 4.3e-25 118.2 82 78.0
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 6.2e-24 114.4 121 50.4
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.1e-23 113.6 122 48.4
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 2.4e-23 112.5 121 48.8
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 4.0e-23 111.7 121 48.8
DCAR_008668 Daucus carota HOM05D004435 ORTHO05D005103 5.3e-23 111.3 121 49.6
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.2e-22 110.2 121 45.5
Lj7C498G9 Lonicera japonica HOM05D004435 ORTHO05D005103 1.2e-22 110.2 121 50.4
Hma1.2p1_0101F.1_g049200 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 2.6e-22 109.0 122 47.5
Hma1.2p1_0101F.1_g049210 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 2.6e-22 109.0 122 47.5
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 3.4e-22 108.6 122 47.5
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 7.6e-22 107.5 122 46.7
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 7.6e-22 107.5 122 47.5
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 7.6e-22 107.5 121 45.5
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.3e-21 106.7 121 47.1
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 2.2e-21 105.9 121 46.3
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.2e-21 105.9 122 46.7
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 2.9e-21 105.5 122 46.7
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 3.8e-21 105.1 122 45.9
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 3.8e-21 105.1 122 46.7
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 3.8e-21 105.1 121 47.1
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 4.9e-21 104.8 121 45.5
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.1e-20 103.6 121 47.9
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 1.9e-20 102.8 121 44.6
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 1.9e-20 102.8 121 47.9
Hma1.2p1_0101F.1_g049280 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 2.4e-20 102.4 123 46.3
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 3.2e-20 102.1 121 46.3
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 3.2e-20 102.1 122 46.7
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 4.2e-20 101.7 121 46.3
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 4.2e-20 101.7 121 46.3
Cpa.g.c29521 Carica papaya HOM05D004435 ORTHO05D005103 5.4e-20 101.3 121 45.5
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 7.1e-20 100.9 121 45.5
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 9.3e-20 100.5 121 46.3
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 9.3e-20 100.5 121 43.0
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 1.2e-19 100.1 121 45.5
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 1.2e-19 100.1 122 42.6
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.2e-19 100.1 121 46.3
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 1.2e-19 100.1 121 43.8
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 1.6e-19 99.8 121 43.0
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 2.1e-19 99.4 121 46.3
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 2.1e-19 99.4 121 43.8
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 2.1e-19 99.4 121 42.1
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 2.7e-19 99.0 121 42.1
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 2.7e-19 99.0 121 44.6
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 6.0e-19 97.8 121 46.3
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 6.0e-19 97.8 121 44.6
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 7.9e-19 97.4 121 42.1
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 7.9e-19 97.4 121 42.1
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 1.0e-18 97.1 121 42.1
BcaC02g12678 Brassica carinata HOM05D004435 ORTHO05D005103 1.3e-18 96.7 121 42.1
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 1.3e-18 96.7 121 42.1
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 1.3e-18 96.7 121 42.1
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 1.3e-18 96.7 121 43.8
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 1.3e-18 96.7 121 45.5
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 1.7e-18 96.3 119 44.5
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 1.7e-18 96.3 119 44.5
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 2.3e-18 95.9 122 42.6
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 2.3e-18 95.9 121 42.1
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.3e-18 95.9 122 42.6
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 2.3e-18 95.9 121 43.8
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 3.9e-18 95.1 122 42.6
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 3.9e-18 95.1 121 43.0
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 3.9e-18 95.1 121 43.0
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 5.1e-18 94.7 121 44.6
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 5.1e-18 94.7 121 43.8
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 6.6e-18 94.4 121 43.0
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 6.6e-18 94.4 121 42.1
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 8.7e-18 94.0 121 40.5
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 1.1e-17 93.6 121 41.3
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 1.1e-17 93.6 121 41.3
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.9e-17 92.8 121 42.1
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 1.9e-17 92.8 121 42.1
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 3.3e-17 92.0 121 42.1
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 4.3e-17 91.7 121 41.3
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 5.6e-17 91.3 121 43.8
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 9.6e-17 90.5 121 42.1
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.6e-16 89.7 121 39.7
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 2.8e-16 89.0 121 42.1
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.2e-16 87.8 121 42.1
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 8.1e-16 87.4 120 40.8
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 8.1e-16 87.4 87 48.3
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 1.4e-15 86.7 121 40.5
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 1.8e-15 86.3 121 41.3
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 1.8e-15 86.3 121 39.7
ATR0605G097 Amborella trichopoda HOM05D004435 ORTHO05D005103 2.4e-15 85.9 123 39.8
ATR0242G001 Amborella trichopoda HOM05D004435 ORTHO05D005103 1.2e-14 83.6 123 39.0
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 1.2e-14 83.6 121 36.4
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 1.2e-14 83.6 87 49.4
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 2.2e-13 79.3 124 39.5
Psat4g016800 Pisum sativum HOM05D004435 ORTHO05D005103 3.5e-11 72.0 80 43.8
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 3.9e-10 68.6 55 58.2
SEGI_18144 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 2.5e-09 65.9 131 31.3
Psat2g140840 Pisum sativum HOM05D004435 ORTHO05D005103 2.1e-08 62.8 54 53.7
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 3.7e-08 62.0 122 30.3
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 1.1e-07 60.5 122 32.0


User provided reference genes

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