Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007237g0040 Nicotiana tabacum HOM05D008696 ORTHO05D010514 2.3e-38 161.8 82 100.0
arahy.Tifrunner.gnm1.ann1.AT0FGT Arachis hypogaea HOM05D008696 ORTHO05D010514 1.0e-17 93.2 59 78.0
arahy.Tifrunner.gnm1.ann1.D6INMV Arachis hypogaea HOM05D008696 ORTHO05D010514 1.0e-17 93.2 59 78.0
arahy.Tifrunner.gnm1.ann1.FXV2QT Arachis hypogaea HOM05D008696 ORTHO05D010514 1.0e-17 93.2 59 78.0
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 1.0e-17 93.2 56 82.1
arahy.Tifrunner.gnm1.ann1.P4RH3S Arachis hypogaea HOM05D008696 ORTHO05D010514 1.0e-17 93.2 59 78.0
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 1.7e-17 92.4 54 83.3
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 1.7e-17 92.4 54 83.3
TPR.G36008 Trifolium pratense HOM05D008696 ORTHO05D010514 3.8e-17 91.3 55 80.0
arahy.Tifrunner.gnm1.ann1.QR678R Arachis hypogaea HOM05D008696 ORTHO05D010514 6.5e-17 90.5 54 83.3
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 1.1e-16 89.7 54 81.5
Solyc00g094520.1 Solanum lycopersicum HOM05D008696 ORTHO05D010514 1.4e-16 89.4 59 78.0
PGSC0003DMG400005437 Solanum tuberosum HOM05D008696 ORTHO05D010514 1.4e-16 89.4 59 78.0
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 1.4e-16 89.4 59 78.0
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 1.9e-16 89.0 53 81.1
Lsat_1_v5_gn_5_16440 Lactuca sativa HOM05D008696 ORTHO05D010514 5.5e-16 87.4 55 80.0
Nn1g10032 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.5e-16 87.4 55 80.0
Nn1g10035 Nelumbo nucifera HOM05D008696 ORTHO05D010514 5.5e-16 87.4 55 80.0
Sp3g25810 Schrenkiella parvula HOM05D008696 ORTHO05D010514 7.1e-16 87.0 54 81.5
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 9.3e-16 86.7 53 83.0
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 3.5e-15 84.7 54 79.6
Nitab4.5_0008578g0070 Nicotiana tabacum HOM05D008696 ORTHO05D002807 1.3e-14 82.8 59 72.9
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 1.3e-14 82.8 59 72.9
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 2.3e-14 82.0 53 79.2
SHI37562 Sapria himalayana HOM05D008696 ORTHO05D010514 6.7e-14 80.5 50 82.0
SHI36364 Sapria himalayana HOM05D012027 ORTHO05D010514 3.7e-12 74.7 56 67.9
Nitab4.5_0000307g0370 Nicotiana tabacum HOM05D008696 ORTHO05D010514 3.4e-10 68.2 47 74.5
TPR.G38982 Trifolium pratense HOM05D008696 ORTHO05D010514 2.9e-09 65.1 53 64.2
Nitab4.5_0000886g0240 Nicotiana tabacum HOM05D008696 ORTHO05D010514 8.4e-09 63.5 50 66.0
Nn1g09944 Nelumbo nucifera HOM05D008696 ORTHO05D010514 3.5e-07 58.2 39 74.4
Nn1g10158 Nelumbo nucifera HOM05D008696 ORTHO05D010514 3.5e-07 58.2 39 74.4
Nn1g10186 Nelumbo nucifera HOM05D008696 ORTHO05D010514 3.5e-07 58.2 39 74.4
Lsat_1_v5_gn_5_60661 Lactuca sativa HOM05D008696 ORTHO05D010514 6.1e-07 57.4 40 72.5
Nitab4.5_0000172g0780 Nicotiana tabacum HOM05D008696 ORTHO05D010514 7.9e-07 57.0 44 68.2
Nitab4.5_0004100g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.9e-06 54.7 37 70.3


User provided reference genes

Program Settings