Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.8e-93 345.9 178 100.0
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.1e-89 332.4 178 96.6
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 1.6e-84 316.2 178 91.6
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 1.7e-83 312.8 178 91.0
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 1.2e-81 306.6 178 88.8
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 8.6e-75 283.9 162 89.5
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.8e-72 276.2 185 83.2
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 6.0e-68 261.2 182 77.5
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 3.3e-66 255.4 182 75.3
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 7.3e-66 254.2 178 78.7
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 7.6e-63 244.2 178 73.6
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 1.3e-62 243.4 157 80.3
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 4.2e-61 238.4 155 80.6
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 9.3e-61 237.3 158 78.5
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 2.7e-60 235.7 158 77.2
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 3.0e-59 232.3 156 78.8
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 1.5e-58 229.9 158 75.3
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 1.5e-58 229.9 158 75.3
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 3.3e-58 228.8 158 74.7
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 3.3e-58 228.8 152 79.6
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 4.3e-58 228.4 158 75.3
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 4.3e-58 228.4 141 83.0
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 5.6e-58 228.0 154 76.6
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 5.6e-58 228.0 141 83.0
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.6e-58 228.0 141 83.0
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 5.6e-58 228.0 159 74.8
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 5.6e-58 228.0 157 75.2
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 1.3e-57 226.9 152 78.3
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 1.3e-57 226.9 158 74.7
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 1.6e-57 226.5 141 80.9
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.6e-57 226.5 148 83.8
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 2.1e-57 226.1 178 69.7
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 2.8e-57 225.7 141 80.9
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 2.8e-57 225.7 151 78.1
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 3.6e-57 225.3 168 69.0
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 4.8e-57 224.9 168 69.0
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 6.2e-57 224.6 159 75.5
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 6.2e-57 224.6 159 75.5
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 6.2e-57 224.6 141 80.1
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 6.2e-57 224.6 141 81.6
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 8.1e-57 224.2 159 75.5
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 1.8e-56 223.0 153 76.5
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.8e-56 223.0 157 73.2
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 3.1e-56 222.2 158 75.3
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 5.3e-56 221.5 158 70.9
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 9.0e-56 220.7 141 78.0
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 9.0e-56 220.7 164 73.2
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 1.2e-55 220.3 167 67.7
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 1.5e-55 219.9 156 73.7
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 1.5e-55 219.9 141 78.7
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.6e-55 219.2 167 66.5
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 5.8e-55 218.0 147 76.9
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 7.6e-55 217.6 141 78.7
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 1.3e-54 216.9 158 70.9
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 1.7e-54 216.5 160 68.1
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 1.7e-54 216.5 141 77.3
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 2.2e-54 216.1 156 69.9
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 3.8e-54 215.3 147 74.8
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.1e-53 213.8 141 75.2
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.1e-53 213.8 141 75.9
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.4e-53 213.4 147 73.5
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 1.9e-53 213.0 137 81.0
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 1.9e-53 213.0 151 73.5
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 7.1e-53 211.1 170 68.2
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 7.1e-53 211.1 152 70.4
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 1.6e-52 209.9 153 71.9
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 1.6e-52 209.9 129 83.7
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 2.7e-52 209.1 146 77.4
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.7e-52 209.1 145 77.2
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 2.7e-52 209.1 147 71.4
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 7.9e-52 207.6 153 70.6
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 1.1e-50 203.8 125 80.8
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 1.1e-50 203.8 155 69.7
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.5e-50 203.4 140 73.6
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 2.5e-50 202.6 154 69.5
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 2.5e-50 202.6 168 65.5
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 5.6e-50 201.4 141 73.0
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 7.4e-50 201.1 152 68.4
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 1.3e-49 200.3 153 68.6
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 1.6e-49 199.9 141 72.3
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 6.2e-49 198.0 141 70.9
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 8.1e-49 197.6 137 75.2
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 1.1e-48 197.2 146 70.5
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 1.4e-48 196.8 141 70.2
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 2.4e-48 196.1 137 72.3
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 9.0e-48 194.1 148 68.2
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 1.2e-47 193.7 140 72.9
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 1.5e-47 193.4 137 73.0
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.5e-47 193.4 154 64.3
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 2.0e-47 193.0 123 76.4
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 2.0e-47 193.0 151 66.2
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 2.6e-47 192.6 137 73.7
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 4.5e-47 191.8 135 74.1
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 7.6e-47 191.0 140 72.1
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 7.6e-47 191.0 140 72.1
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 9.9e-47 190.7 150 66.0
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 2.9e-46 189.1 135 73.3
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 4.9e-46 188.3 132 75.0
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 6.4e-46 188.0 142 70.4
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 6.4e-46 188.0 142 70.4
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 8.4e-46 187.6 141 69.5
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 2.4e-45 186.0 142 69.0
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 2.4e-45 186.0 142 69.0
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 5.5e-45 184.9 142 69.0
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 6.7e-43 177.9 159 61.0
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 2.5e-42 176.0 126 74.6
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 1.6e-41 173.3 126 73.8
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 1.6e-41 173.3 130 66.9
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 6.2e-41 171.4 104 83.7
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 6.2e-41 171.4 112 78.6
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 2.4e-40 169.5 99 83.8
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 2.4e-40 169.5 120 68.3
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 5.8e-39 164.9 101 80.2
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 1.0e-38 164.1 99 83.8
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 1.1e-37 160.6 110 74.5
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 4.2e-37 158.7 126 67.5
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 3.5e-36 155.6 118 65.3
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 8.7e-35 151.0 143 50.3
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 1.9e-34 149.8 101 79.2
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 4.8e-33 145.2 99 74.7
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.8e-32 143.3 121 59.5
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 1.3e-30 137.1 110 65.5
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 1.6e-28 130.2 83 77.1
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 1.9e-26 123.2 77 81.8
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 6.9e-24 114.8 74 79.7
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 6.1e-20 101.7 102 54.9
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 3.9e-19 99.0 129 42.6
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 5.1e-19 98.6 129 45.7
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 8.2e-17 91.3 95 52.6
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 3.1e-16 89.4 125 40.8
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 2.0e-15 86.7 140 45.7
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 2.9e-14 82.8 74 58.1
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 1.1e-13 80.9 51 74.5
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 4.4e-10 68.9 47 70.2
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 7.0e-08 61.6 48 62.5
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 7.0e-08 61.6 48 62.5
Prupe.5G038700 Prunus persica HOM05D005569 ORTHO05D007052 2.2e-06 56.6 39 69.2


User provided reference genes

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