Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.2e-104 380.6 243 100.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-78 294.3 275 78.5
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-74 282.0 243 70.8
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-71 272.3 261 63.2
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 3.9e-70 268.9 241 81.3
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-69 266.9 260 71.9
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-69 266.5 275 72.0
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-66 256.9 258 75.2
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-65 252.3 196 71.9
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-64 248.8 269 57.2
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.7e-62 241.5 196 71.4
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-62 241.1 196 69.9
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-61 237.7 190 73.2
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-59 234.2 273 53.5
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-59 231.5 193 69.4
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.5e-58 230.3 197 67.5
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-57 226.1 242 66.9
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.5e-57 224.6 190 67.9
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-53 213.8 167 73.1
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-53 211.1 189 67.7
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.7e-53 211.1 268 53.0
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-52 210.7 157 75.2
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.8e-52 208.8 177 68.9
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-51 206.8 226 59.3
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-50 202.6 166 69.3
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-48 196.4 154 71.4
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-47 192.6 178 66.9
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-44 183.3 161 69.6
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-44 182.6 156 67.9
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-42 174.9 156 64.7
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.7e-42 174.9 166 65.7
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.9e-41 172.9 156 66.0
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-39 164.9 147 66.0
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-38 164.1 145 89.0
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-36 157.5 140 65.0
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-36 156.0 145 89.7
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-35 154.5 273 42.5
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-35 153.7 163 60.1
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.4e-35 153.3 166 67.5
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-33 147.9 167 56.9
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-32 143.3 118 72.9
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-32 142.5 129 62.0
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-32 141.7 166 56.0
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-31 139.8 242 48.3
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.8e-30 137.1 279 34.8
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-29 133.7 94 81.9
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-29 133.3 233 40.8
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.6e-29 133.3 81 90.1
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.8e-29 131.3 93 74.2
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.8e-28 129.0 258 35.3
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.4e-27 125.6 244 36.1
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-27 125.2 93 73.1
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.1e-27 124.8 141 58.2
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-26 124.4 124 62.1
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-26 124.4 276 33.7
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 2.0e-26 123.6 266 33.5
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-26 123.2 118 89.8
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-25 120.9 77 88.3
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-25 120.6 238 38.2
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-25 119.0 127 59.1
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 6.6e-25 118.6 166 42.2
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-25 118.2 87 67.8
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.5e-24 117.5 156 44.9
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-24 117.1 135 55.6
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-24 115.9 124 87.9
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 7.2e-24 115.2 166 41.6
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 9.5e-24 114.8 87 77.0
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-23 114.0 156 44.2
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.7e-23 112.5 151 44.4
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.0e-22 109.8 151 55.0
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 4.0e-22 109.4 200 37.5
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-19 101.3 62 75.8
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-19 99.8 67 80.6
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-19 99.4 163 44.2
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-15 85.5 95 53.7
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-14 84.0 56 83.9
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-13 79.7 76 57.9
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.5e-13 78.6 147 37.4
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-12 76.3 180 32.2
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-12 76.3 71 62.0
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.7e-12 76.3 57 78.9
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-12 75.1 256 33.2
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.3e-12 75.1 77 53.2
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-11 73.6 150 36.7
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-10 71.2 163 33.7
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 70.9 164 32.3
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-10 70.5 165 33.3
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 69.3 163 42.9
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.0e-09 68.2 114 39.5
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.7e-09 67.4 154 35.1
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 67.4 161 32.9
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-09 67.0 153 34.6
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-09 67.0 164 32.9
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-09 66.6 149 33.6
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-09 66.2 150 34.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 65.9 165 32.1
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 65.9 271 33.9
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-09 65.5 38 76.3
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-09 65.1 164 31.7
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 64.7 165 32.7
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 1.1e-08 64.7 121 33.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 64.3 282 27.0
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.9 177 32.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-08 63.2 163 31.3
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.3e-08 62.8 112 36.6
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-08 62.4 229 28.4
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-07 61.2 141 37.6
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 60.5 164 31.7
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 60.5 161 32.9
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-07 60.1 168 31.5
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.8e-07 60.1 170 29.4
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-07 59.3 145 36.6
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.7e-07 59.3 150 30.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-07 58.9 238 38.2
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-07 58.9 174 32.2
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-06 58.2 102 38.2
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 58.2 39 71.8
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-06 58.2 282 26.6
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 1.1e-06 58.2 107 35.5
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 57.0 274 29.6
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 57.0 83 47.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 57.0 82 47.6
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 56.6 164 41.5
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 56.6 166 41.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 56.6 160 37.5
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-06 56.6 168 31.0
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 56.2 251 29.9
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 56.2 147 51.0
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 56.2 179 31.8
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 5.2e-06 55.8 233 30.9
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 5.2e-06 55.8 146 33.6
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 5.2e-06 55.8 168 30.4
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-06 55.8 150 32.0
PGSC0003DMG400030157 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.2e-06 55.8 134 32.1
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-06 55.5 164 29.3


User provided reference genes

Program Settings