Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 0.0e+00 2567.7 1352 100.0
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 0.0e+00 2261.5 1268 94.3
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 0.0e+00 1782.3 1291 75.8
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 0.0e+00 1659.4 1252 73.2
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 0.0e+00 1566.2 1254 71.0
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 0.0e+00 1240.7 1021 70.3
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 0.0e+00 1112.1 854 71.7
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 5.9e-309 1064.7 1223 55.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 2.4e-246 856.7 1364 44.1
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.2e-210 735.3 1088 48.5
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.9e-207 726.9 1343 41.2
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 5.5e-206 722.6 1343 41.1
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 7.0e-169 599.4 1281 39.0
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 2.2e-162 577.8 1349 38.0
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 4.3e-158 563.5 1332 36.3
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 1.4e-156 558.5 1308 36.8
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 8.9e-156 555.8 1317 37.6
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 4.4e-155 553.5 1320 34.9
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 9.9e-155 552.4 1323 37.1
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.0e-151 542.3 1075 41.2
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 9.0e-148 529.3 1306 36.8
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 6.0e-144 516.5 1239 35.8
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.1e-142 512.3 1369 34.3
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 5.3e-140 503.4 1325 35.2
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.9e-138 497.7 1208 36.4
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 1.9e-137 495.0 1250 34.5
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 2.3e-135 488.0 1179 36.1
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 6.7e-135 486.5 1284 36.3
PGSC0003DMG400011484 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.4e-130 469.5 954 41.3
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 7.9e-128 463.0 1264 33.8
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 3.9e-127 460.7 1294 32.9
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 1.3e-125 455.7 1329 34.8
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 1.0e-122 446.0 1221 34.1
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 7.1e-121 439.9 1397 33.2
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 1.6e-120 438.7 1396 34.0
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 3.9e-119 434.1 1370 31.9
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 5.1e-119 433.7 1382 33.9
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 8.7e-119 433.0 1397 33.0
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 2.5e-118 431.4 1187 33.9
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 2.6e-115 421.4 1136 35.5
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 2.2e-114 418.3 1385 32.8
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 5.5e-113 413.7 1381 32.8
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 5.5e-113 413.7 1335 33.5
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.6e-112 412.1 1321 32.0
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 4.6e-112 410.6 1288 32.5
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 7.9e-112 409.8 1261 34.0
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 1.0e-111 409.5 1387 33.5
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 1.8e-111 408.7 1343 32.2
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 2.3e-111 408.3 1216 32.8
PGSC0003DMG400011472 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.5e-110 405.6 959 36.4
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 1.2e-107 396.0 1297 33.8
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 4.5e-107 394.0 1337 32.5
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 5.9e-107 393.7 1298 33.1
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 1.9e-105 388.7 1332 32.1
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 5.5e-105 387.1 1337 32.9
Sopen04g005330 Solanum pennellii HOM05D000283 ORTHO05D006673 2.1e-104 385.2 927 37.1
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 2.7e-104 384.8 1092 34.2
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 2.7e-104 384.8 1292 33.1
PGSC0003DMG400011488 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.4e-100 372.5 581 46.0
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 5.3e-100 370.5 1333 31.3
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 3.8e-98 364.4 907 36.3
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 1.9e-97 362.1 1312 31.9
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 2.5e-97 361.7 1246 31.6
Sopen04g005350 Solanum pennellii HOM05D000283 ORTHO05D006673 1.6e-96 359.0 909 37.6
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 2.3e-95 355.1 1337 31.2
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 5.7e-94 350.5 1337 31.1
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 9.7e-94 349.7 1328 30.9
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.8e-92 345.5 1339 30.8
Solyc04g010155.2 Solanum lycopersicum HOM05D000283 ORTHO05D006673 3.1e-92 344.7 668 41.2
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 7.7e-91 340.1 1333 30.5
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 7.7e-91 340.1 1421 31.0
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 2.9e-90 338.2 1215 30.5
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 2.3e-87 328.6 1376 30.2
Sabra08G0033700 Salix brachista HOM05D000283 ORTHO05D006673 3.7e-85 321.2 1342 29.7
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 7.7e-83 313.5 532 39.3
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 2.4e-76 292.0 1357 29.8
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-75 287.3 348 54.0
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 4.0e-71 274.6 1284 28.8
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 4.1e-68 264.6 1242 29.1
DCAR_010662 Daucus carota HOM05D000283 ORTHO05D006673 3.5e-67 261.5 1331 28.2
DCAR_020267 Daucus carota HOM05D000457 ORTHO05D000560 9.5e-65 253.4 1095 29.8
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 8.3e-61 240.4 1229 28.2
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 1.9e-60 239.2 1321 27.6
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 7.0e-60 237.3 268 49.3
Solyc04g010180.4 Solanum lycopersicum HOM05D000283 ORTHO05D006673 2.3e-55 222.2 166 71.7
THA.LOC104799366 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 1.4e-52 213.0 1259 27.9
ClCG09G020310 Citrullus lanatus HOM05D000283 ORTHO05D006673 2.4e-52 212.2 1353 25.2
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 7.1e-52 210.7 632 35.1
THA.LOC104809887 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 1.9e-49 202.6 1192 28.8
PGSC0003DMG400042471 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.8e-47 196.1 180 62.8
CAN.G786.35 Capsicum annuum HOM05D000283 ORTHO05D006673 1.1e-44 186.8 141 70.9
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 1.1e-41 176.8 1294 26.5
ClCG09G020330 Citrullus lanatus HOM05D000283 ORTHO05D006673 1.5e-41 176.4 668 30.7
Sed0006338 Sechium edule HOM05D000283 ORTHO05D006673 2.4e-39 169.1 668 30.7
PGSC0003DMG400039757 Solanum tuberosum HOM05D000283 ORTHO05D006673 5.2e-39 167.9 167 60.5
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 3.4e-38 165.2 883 29.0
AL6G24200 Arabidopsis lyrata HOM05D010678 ORTHO05D006673 6.4e-37 161.0 1303 26.4
PGSC0003DMG400011503 Solanum tuberosum HOM05D000283 ORTHO05D006673 7.1e-36 157.5 182 54.4
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 2.1e-35 156.0 784 27.6
Sp6g30440 Schrenkiella parvula HOM05D010678 ORTHO05D006673 7.8e-35 154.1 1232 26.1
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 3.0e-34 152.1 697 28.3
Sed0026677 Sechium edule HOM05D000283 ORTHO05D006673 3.9e-34 151.8 661 29.7
Sopen04g005300 Solanum pennellii HOM05D000283 ORTHO05D006673 1.5e-33 149.8 889 26.7
MELO3C025491.2 Cucumis melo HOM05D000283 ORTHO05D006673 6.2e-32 144.4 675 28.4
MELO3C025488.2 Cucumis melo HOM05D000283 ORTHO05D006673 2.4e-31 142.5 662 27.2
CDE07G1705 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 2.2e-29 136.0 1355 25.5
CsaV3_5G026060 Cucumis sativus L. HOM05D000283 ORTHO05D006673 4.9e-29 134.8 682 28.0
AT5G13590 Arabidopsis thaliana HOM05D010678 ORTHO05D006673 5.4e-28 131.3 1302 25.8
Thhalv10012490m.g Eutrema salsugineum HOM05D010678 ORTHO05D006673 5.4e-28 131.3 1252 26.9
CARHR199850 Cardamine hirsuta HOM05D010678 ORTHO05D006673 2.7e-27 129.0 521 31.7
Carub.0006s1175 Capsella rubella HOM05D010678 ORTHO05D006673 1.5e-25 123.2 1301 26.3
CsaV3_5G026100 Cucumis sativus L. HOM05D000283 ORTHO05D006673 1.2e-22 113.6 363 32.0
MELO3C025492.2 Cucumis melo HOM05D000283 ORTHO05D006673 1.5e-22 113.2 627 26.2
BcaNung01899 Brassica carinata HOM05D010678 ORTHO05D006673 5.8e-22 111.3 473 30.2
PGSC0003DMG400011490 Solanum tuberosum HOM05D000283 ORTHO05D006673 3.8e-21 108.6 160 47.5
PGSC0003DMG400037112 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.4e-21 107.8 208 41.8
Oeu025164.1 Olea europaea HOM05D000283 ORTHO05D010811 3.3e-17 95.5 296 31.8
CDE04G2023 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 3.7e-16 92.0 1330 23.5
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.8e-15 89.7 580 26.9
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 9.0e-15 87.4 234 35.5
Sopen04g005280 Solanum pennellii HOM05D000283 ORTHO05D006673 4.5e-14 85.1 89 59.6
SGA_v2.0_scaffold44G16695 Striga asiatica HOM05D000283 ORTHO05D006673 4.9e-13 81.6 629 27.0
ATR0681G260 Amborella trichopoda HOM05D000283 ORTHO05D006673 1.6e-11 76.6 1169 23.8
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 7.9e-11 74.3 1444 24.0
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 1.3e-10 73.6 802 25.4
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 2.3e-10 72.8 723 25.9
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 5.1e-10 71.6 528 26.9
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 5.1e-10 71.6 1384 23.6
SGA_v2.0_scaffold44G16697 Striga asiatica HOM05D000283 ORTHO05D006673 5.1e-10 71.6 241 32.0
Solyc04g010130.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 6.7e-10 71.2 91 46.2
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 4.3e-09 68.6 842 24.8


User provided reference genes

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