Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 3.3e-204 714.9 383 100.0
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.4e-183 644.4 386 86.5
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.1e-151 540.4 384 79.4
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 2.5e-148 529.3 396 74.7
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 2.9e-91 339.7 396 55.8
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 6.2e-86 322.0 414 52.7
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 6.4e-83 312.0 414 51.9
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 1.9e-82 310.5 400 49.5
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 4.1e-82 309.3 388 54.4
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 3.5e-81 306.2 424 52.8
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 7.8e-81 305.1 409 48.2
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.3e-80 304.3 413 48.9
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 1.7e-80 303.9 416 48.8
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 3.3e-79 299.7 398 50.0
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 5.6e-79 298.9 410 49.0
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 7.3e-79 298.5 417 50.1
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.2e-78 297.7 414 49.0
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.6e-78 297.4 415 49.2
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 1.4e-77 294.3 409 49.1
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 2.0e-76 290.4 197 74.1
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 2.6e-76 290.0 426 49.3
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 4.4e-76 289.3 406 49.8
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.2e-75 287.0 400 46.0
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.3e-75 285.0 416 48.1
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 3.0e-72 276.6 407 47.2
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 3.9e-72 276.2 424 48.1
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 4.3e-71 272.7 411 45.5
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 5.6e-71 272.3 391 46.8
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 7.3e-71 271.9 432 51.4
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.3e-69 266.9 393 46.3
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 5.2e-69 265.8 419 48.2
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.4e-68 263.1 398 47.7
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 3.4e-68 263.1 399 44.6
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 3.7e-67 259.6 431 44.1
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 6.4e-67 258.8 418 45.9
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 1.1e-66 258.1 380 46.1
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.9e-66 257.3 418 46.4
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 5.4e-66 255.8 420 46.7
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 7.1e-66 255.4 418 45.7
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 2.1e-65 253.8 387 49.6
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.0e-64 251.5 426 44.8
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.3e-64 251.1 392 45.2
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 6.6e-64 248.8 363 47.4
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.2e-62 244.6 312 51.0
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 1.6e-62 244.2 478 43.1
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.6e-62 244.2 400 45.5
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 5.2e-61 239.2 386 45.3
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 5.2e-61 239.2 433 47.1
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 3.4e-60 236.5 389 45.8
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 4.4e-60 236.1 408 46.8
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 4.9e-59 232.6 425 42.4
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.4e-58 230.3 381 47.0
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 8.7e-56 221.9 379 44.1
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.1e-55 221.5 379 44.1
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.9e-55 220.7 360 42.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.3e-54 218.0 395 42.0
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 8.1e-54 215.3 305 46.9
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.5e-52 211.1 379 42.0
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 1.5e-52 211.1 401 41.6
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 2.6e-52 210.3 379 42.7
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 4.5e-52 209.5 439 39.9
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 4.9e-51 206.1 369 41.2
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.4e-50 202.6 403 38.7
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 7.1e-50 202.2 440 40.9
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 4.6e-49 199.5 377 43.0
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 6.0e-49 199.1 277 50.5
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-48 198.0 317 43.5
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 2.3e-48 197.2 276 44.2
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 2.5e-47 193.7 360 43.1
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 4.3e-47 193.0 390 42.3
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 3.1e-45 186.8 389 38.8
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 2.0e-44 184.1 397 40.8
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 4.2e-42 176.4 421 41.1
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 9.3e-42 175.3 96 81.2
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 9.3e-42 175.3 347 40.9
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 2.7e-41 173.7 316 45.6
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 1.0e-40 171.8 328 45.4
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 1.8e-40 171.0 405 44.2
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.3e-40 170.6 384 39.3
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 3.0e-40 170.2 392 36.7
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 5.1e-40 169.5 370 42.2
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 8.7e-40 168.7 362 37.8
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 5.6e-39 166.0 368 38.6
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 9.6e-39 165.2 369 41.5
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 4.0e-37 159.8 288 36.5
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 6.9e-37 159.1 363 34.7
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.5e-36 156.4 160 51.9
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 8.4e-35 152.1 231 47.2
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.1e-33 147.5 386 35.8
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 2.5e-31 140.6 347 36.6
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 2.4e-29 134.0 366 34.4
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.1e-29 133.7 243 39.5
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.3e-29 132.9 361 33.2
Ca_13089_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 5.9e-28 129.4 297 39.4
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 7.6e-28 129.0 378 32.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 2.2e-27 127.5 296 34.1
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 2.9e-27 127.1 397 33.8
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 2.7e-25 120.6 137 67.9
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 5.1e-24 116.3 289 33.6
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 6.7e-24 115.9 369 32.8
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 2.5e-23 114.0 282 34.4
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.2e-22 110.9 105 54.3
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 3.7e-22 110.2 199 48.2
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 1.4e-21 108.2 276 33.0
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.1e-21 107.1 316 38.6
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 5.3e-21 106.3 361 29.1
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 5.0e-19 99.8 296 33.1
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 5.5e-18 96.3 397 31.5
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 9.4e-18 95.5 275 36.0
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 1.6e-17 94.7 90 48.9
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 3.6e-17 93.6 355 33.8
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 4.6e-17 93.2 275 37.1
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 4.6e-17 93.2 275 37.1
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 1.0e-16 92.0 344 34.6
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 1.0e-16 92.0 345 34.5
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 1.0e-16 92.0 345 34.5
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 1.4e-16 91.7 417 26.6
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 1.8e-16 91.3 292 35.3
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 5.1e-16 89.7 276 33.0
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea HOM05D005213 ORTHO05D006229 8.8e-16 89.0 314 27.4
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 8.8e-16 89.0 276 33.0
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 8.8e-16 89.0 292 34.9
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 8.8e-16 89.0 276 33.0
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 8.8e-16 89.0 362 28.2
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 4.4e-15 86.7 271 33.9
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 9.7e-15 85.5 272 31.2
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 2.8e-14 84.0 288 34.7
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 3.7e-14 83.6 272 33.5
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 3.7e-14 83.6 292 34.9
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 3.7e-14 83.6 292 34.9
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea HOM05D005213 ORTHO05D006229 6.3e-14 82.8 328 26.5
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 6.3e-14 82.8 294 28.9
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.1e-13 82.0 292 34.6
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 2.6e-12 77.4 108 51.9
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 3.4e-12 77.0 362 31.8
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 4.5e-12 76.6 170 41.8
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 5.9e-12 76.3 218 40.4
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.9e-12 76.3 309 31.1
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.0e-11 75.5 293 30.7
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.1e-10 72.0 362 33.4
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 4.2e-10 70.1 39 92.3
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 3.6e-09 67.0 241 32.0
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.8e-08 64.7 80 53.8
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 2.3e-08 64.3 134 42.5
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 3.0e-08 63.9 290 27.9
HPP92_004172 Vanilla planifolia HOM05D001722 ORTHO05D001910 5.2e-08 63.2 71 43.7
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 1.5e-07 61.6 359 24.5
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 2.8e-06 57.4 161 44.1


User provided reference genes

Program Settings