Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007210g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.8e-50 199.9 96 100.0
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.6e-17 90.5 45 91.1
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.6e-17 90.5 45 91.1
Nitab4.5_0000999g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.3e-16 87.0 45 84.4
Nitab4.5_0008086g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-15 86.3 45 88.9
Nitab4.5_0008011g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.1e-15 84.0 45 77.8
Nitab4.5_0008086g0060 Nicotiana tabacum HOM05D002441 ORTHO05D284605 7.8e-14 80.5 49 79.6
Nitab4.5_0004405g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-12 76.6 39 89.7
Nitab4.5_0005752g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.6e-12 73.6 39 87.2
Nitab4.5_0013233g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.6e-12 73.6 45 66.7
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-11 73.2 45 62.2
Nitab4.5_0006081g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-11 73.2 45 71.1
Nitab4.5_0013078g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.8e-11 72.0 50 56.0
Nitab4.5_0014003g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.6e-11 71.6 45 62.2
Nitab4.5_0020633g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.6e-11 71.6 45 64.4
Nitab4.5_0000632g0070 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.7e-11 71.2 45 64.4
Nitab4.5_0002975g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.7e-11 71.2 45 64.4
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 2.4e-10 68.9 44 61.4
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.1e-10 68.6 45 60.0
Nitab4.5_0004422g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.1e-10 68.6 45 60.0
Nitab4.5_0010449g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.0e-10 68.2 54 55.6
Nitab4.5_0000212g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.8e-10 67.4 54 51.9
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 6.8e-10 67.4 56 53.6
Nitab4.5_0011677g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-09 66.2 45 60.0
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.0e-09 65.9 54 51.9
Nitab4.5_0000497g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.4e-09 64.7 54 51.9
Nitab4.5_0009232g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.4e-09 64.7 45 57.8
Nitab4.5_0004881g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.8e-09 64.3 50 56.0
Nitab4.5_0003330g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.9e-09 63.5 43 60.5
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.9e-09 63.5 45 62.2
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-08 63.2 54 50.0
Nitab4.5_0006365g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-08 63.2 51 54.9
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-08 62.8 45 55.6
Nitab4.5_0012454g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.2e-08 62.4 70 42.9
Nitab4.5_0003435g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.9e-08 62.0 45 57.8
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.9e-08 62.0 45 55.6
Nitab4.5_0000109g0580 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.8e-08 61.6 45 66.7
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.8e-08 61.6 45 53.3
CAN.G453.5 Capsicum annuum HOM05D002441 ORTHO05D008317 6.4e-08 60.8 45 57.8
Nitab4.5_0002444g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.4e-08 60.5 43 55.8
Nitab4.5_0007509g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.4e-08 60.5 39 61.5
Nitab4.5_0000909g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.1e-07 60.1 54 50.0
Nitab4.5_0011843g0050 Nicotiana tabacum HOM05D011943 ORTHO05D008317 1.1e-07 60.1 82 39.0
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-07 59.7 50 52.0
Nitab4.5_0000044g0460 Nicotiana tabacum HOM05D011943 ORTHO05D008317 3.2e-07 58.5 45 53.3
Nitab4.5_0004363g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.4e-07 57.8 35 65.7
Nitab4.5_0006882g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.1e-07 57.4 69 42.0
Nitab4.5_0007703g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-06 56.2 39 59.0
Nitab4.5_0007230g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.1e-06 55.8 32 71.9
Nitab4.5_0003517g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.7e-06 55.5 54 46.3
arahy.Tifrunner.gnm1.ann1.MEW2SM Arachis hypogaea HOM05D002441 ORTHO05D002376 3.5e-06 55.1 50 48.0
Peaxi162Scf00060g00311 Petunia axillaris HOM05D002441 ORTHO05D002376 3.5e-06 55.1 35 60.0
PGSC0003DMG400005509 Solanum tuberosum HOM05D011943 ORTHO05D015721 4.6e-06 54.7 35 60.0
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 7.8e-06 53.9 50 44.0
Nitab4.5_0004430g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.8e-06 53.9 45 46.7
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 7.8e-06 53.9 35 57.1


User provided reference genes

Program Settings