Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007204g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-40 169.5 84 100.0
Nitab4.5_0003241g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-18 94.7 89 59.6
Nitab4.5_0000028g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-13 79.3 98 49.0
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-13 77.8 41 87.8
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-13 77.0 44 81.8
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.9e-13 76.6 41 87.8
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-12 74.7 41 82.9
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-12 74.3 44 77.3
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-12 74.3 44 77.3
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 6.4e-12 73.9 44 77.3
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.4e-12 73.9 44 79.5
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-12 73.6 41 82.9
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-12 73.6 44 77.3
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-11 73.2 44 77.3
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 1.4e-11 72.8 44 72.7
Nitab4.5_0002164g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-11 72.4 41 80.5
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-11 72.0 41 78.0
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-11 72.0 44 72.7
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-11 71.6 44 75.0
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-11 71.6 41 78.0
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.1e-11 71.2 44 77.3
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-11 70.9 41 78.0
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.1e-11 70.5 44 72.7
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-10 69.3 98 41.8
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-10 68.9 41 80.5
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-10 68.9 43 74.4
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-10 68.6 41 78.0
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-10 68.6 44 72.7
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 3.5e-10 68.2 46 69.6
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-10 67.0 43 74.4
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-10 67.0 44 68.2
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-10 67.0 43 69.8
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-09 66.6 41 75.6
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-09 64.7 44 72.7
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-09 63.9 34 85.3
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 62.0 36 80.6
Nitab4.5_0005500g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 62.0 36 80.6
Nitab4.5_0003260g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 61.6 36 80.6
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 60.8 41 70.7
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 60.8 41 70.7
Nitab4.5_0000194g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 59.3 30 90.0
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 59.3 44 63.6
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 58.9 34 79.4
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.8e-07 58.5 42 61.9
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 44 59.1
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 44 59.1
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 58.2 45 62.2
Nitab4.5_0000638g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 56.6 44 54.5
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 56.6 44 61.4
Nitab4.5_0000045g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 110 37.3
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 45 64.4
Nitab4.5_0000175g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 44 63.6
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 56.2 41 68.3
Nitab4.5_0000261g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 55.8 36 72.2
Nitab4.5_0004101g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 55.8 43 60.5
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 76 46.1
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-06 55.5 43 62.8
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 44 59.1
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 44 61.4
Nitab4.5_0005810g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 36 66.7
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 54.7 33 75.8
Nitab4.5_0001124g0090 Nicotiana tabacum HOM05D023645 ORTHO05D000007 5.2e-06 54.3 42 61.9
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 54.3 44 59.1
Nitab4.5_0006435g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 54.3 42 61.9
Nitab4.5_0001987g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 41 61.0
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 44 56.8
Nitab4.5_0006879g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 53.9 36 66.7
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-06 53.5 45 64.4
Nitab4.5_0004621g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-06 53.5 30 73.3


User provided reference genes

Program Settings