Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 9.3e-122 440.3 229 100.0
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.1e-113 412.5 229 93.4
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 2.2e-78 296.2 227 70.9
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 2.9e-75 285.8 225 70.7
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.3e-71 272.3 229 70.7
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 1.3e-70 270.4 229 70.3
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.6e-60 236.9 228 65.4
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 8.0e-49 198.0 247 52.2
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 7.0e-45 184.9 246 49.6
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 9.2e-45 184.5 246 49.2
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 3.3e-42 176.0 243 48.6
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 9.5e-42 174.5 241 47.7
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 2.3e-35 153.3 220 48.2
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 2.9e-30 136.3 225 45.3
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 1.6e-28 130.6 251 39.8
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 5.1e-27 125.6 243 41.6
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 5.6e-26 122.1 235 38.3
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.1e-24 116.3 252 38.1
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 5.2e-24 115.5 233 37.8
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 2.2e-22 110.2 228 37.7
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 4.9e-22 109.0 236 35.6
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.2e-20 104.4 216 38.4
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 1.2e-20 104.4 234 36.8
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 1.2e-20 104.4 244 35.2
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 1.3e-19 100.9 225 36.4
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 5.1e-19 99.0 232 34.5
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 8.6e-19 98.2 228 34.6
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.5e-18 97.4 251 32.7
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 1.5e-18 97.4 222 36.5
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 9.6e-18 94.7 231 33.8
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 9.6e-18 94.7 245 34.7
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 1.2e-17 94.4 233 31.8
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 1.6e-17 94.0 246 35.4
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 2.1e-17 93.6 219 37.4
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-16 91.3 216 38.4
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.1e-16 91.3 147 44.2
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 8.9e-16 88.2 225 33.3
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 1.2e-15 87.8 276 32.6
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 2.6e-15 86.7 227 33.5
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 2.6e-15 86.7 230 31.3
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 4.4e-15 85.9 234 34.6
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 7.6e-15 85.1 228 33.8
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 9.9e-15 84.7 273 30.4
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 1.3e-14 84.3 227 31.3
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 6.4e-14 82.0 230 30.4
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 8.4e-14 81.6 232 34.9
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 1.1e-13 81.3 72 58.3
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.9e-13 80.5 198 36.4
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 2.4e-13 80.1 234 30.8
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 7.1e-13 78.6 74 52.7
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 1.2e-12 77.8 137 40.1
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.2e-12 77.8 231 31.2
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.1e-12 77.0 272 30.5
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 2.7e-12 76.6 269 31.6
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.7e-12 76.6 263 29.7
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 2.7e-12 76.6 235 31.9
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 3.5e-12 76.3 206 31.1
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 6.0e-12 75.5 98 41.8
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 1.7e-11 73.9 228 31.1
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 6.6e-11 72.0 107 39.3
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 1.5e-10 70.9 208 30.3
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 3.3e-10 69.7 206 30.1
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 5.6e-10 68.9 248 26.2
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 1.3e-09 67.8 258 29.1
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.3e-09 67.8 253 28.5
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 1.6e-09 67.4 245 31.4
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 1.6e-09 67.4 232 30.2
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 2.1e-09 67.0 87 40.2
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 2.8e-09 66.6 170 34.7
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 1.1e-08 64.7 221 30.8
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.4e-08 64.3 64 50.0
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 4.0e-08 62.8 205 33.2
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 4.0e-08 62.8 247 27.9
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 4.0e-08 62.8 205 29.3
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 9.0e-08 61.6 240 28.3
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 3.4e-07 59.7 232 25.9
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 7.6e-07 58.5 106 37.7
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 7.6e-07 58.5 205 28.8
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.3e-06 57.8 198 29.8
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 2.2e-06 57.0 203 30.5
AL6G38110 Arabidopsis lyrata HOM05D002043 ORTHO05D002207 4.9e-06 55.8 128 35.2
Os06g0150300 Oryza sativa ssp. japonica HOM05D025253 ORTHO05D023417 6.4e-06 55.5 220 27.3
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 6.4e-06 55.5 73 42.5


User provided reference genes

Program Settings