Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007170g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-60 235.0 118 100.0
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-42 176.0 106 85.8
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-41 171.8 106 83.0
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-41 171.0 106 84.0
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-41 171.0 106 84.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-40 169.5 110 80.0
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-39 164.5 106 80.2
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-38 162.9 105 80.0
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-38 162.9 106 82.1
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-38 161.4 106 79.2
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-36 156.4 106 76.4
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-36 154.8 106 77.4
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-35 152.1 106 76.4
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-35 151.0 106 73.6
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-34 147.9 96 82.3
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-33 144.1 98 78.6
Nitab4.5_0001859g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-32 141.7 107 73.8
Nitab4.5_0011788g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-32 141.0 107 71.0
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-31 140.2 105 73.3
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-31 140.2 106 70.8
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-31 137.1 99 76.8
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-30 134.0 80 86.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-29 131.3 95 71.6
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-27 124.0 106 66.0
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-25 119.4 114 57.9
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-25 119.0 67 88.1
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-20 100.9 70 72.9
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-19 99.4 65 81.5
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-17 90.5 65 73.8
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-14 83.2 106 48.1
Nitab4.5_0022442g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-14 82.8 57 75.4
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-14 82.0 44 93.2
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-14 80.5 44 90.9
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-13 80.1 47 85.1
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-13 79.7 44 90.9
Nitab4.5_0000142g0510 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-13 79.7 57 71.9
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-13 79.7 44 88.6
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-13 79.0 44 90.9
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-13 78.6 44 90.9
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-13 78.2 44 88.6
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-13 77.4 44 86.4
Nitab4.5_0000026g0200 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-12 76.3 72 61.1
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-12 76.3 44 84.1
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.5 44 86.4
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.5 44 81.8
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-10 68.9 90 43.3
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-10 68.2 43 81.4
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-10 67.8 44 77.3
Nitab4.5_0002897g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-10 67.8 42 81.0
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-10 67.4 43 76.7
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.0 44 75.0
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-09 67.0 96 41.7
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-09 66.6 37 89.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-09 65.9 91 44.0
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-09 65.9 96 41.7
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-09 65.5 44 70.5
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-09 64.3 84 48.8
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-09 64.3 44 77.3
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-08 62.8 36 86.1
Nitab4.5_0004222g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-08 62.0 51 64.7
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-08 61.2 54 63.0
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.3e-07 60.1 91 38.5
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.3e-07 60.1 66 50.0
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 59.7 91 40.7
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 59.7 32 90.6
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-07 59.7 52 57.7
Nitab4.5_0000134g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-07 58.9 45 71.1
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-07 57.4 38 68.4
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-06 56.6 96 36.5
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-06 56.6 38 73.7
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-06 56.6 91 37.4
Nitab4.5_0001215g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-06 56.2 99 37.4
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 2.5e-06 55.8 91 38.5
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-06 55.8 38 71.1
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 4.3e-06 55.1 97 38.1


User provided reference genes

Program Settings