Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 3.8e-236 821.6 594 100.0
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 5.4e-198 694.9 595 79.7
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 1.6e-162 577.0 614 76.5
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 5.3e-153 545.4 594 69.0
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 5.9e-152 542.0 590 68.8
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 2.3e-140 503.4 619 64.6
PGSC0003DMG400010305 Solanum tuberosum HOM05D001846 ORTHO05D005785 3.3e-94 350.1 307 87.9
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 4.4e-83 313.2 599 44.7
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 1.8e-76 291.2 613 48.6
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 5.8e-75 286.2 595 38.5
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 4.2e-73 280.0 596 42.3
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 6.2e-69 266.2 587 39.0
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 9.0e-68 262.3 587 38.7
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 3.4e-67 260.4 409 46.5
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 7.6e-67 259.2 592 40.5
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 2.4e-65 254.2 411 46.0
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 6.7e-63 246.1 473 43.3
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 8.7e-63 245.7 584 39.9
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 1.5e-62 245.0 497 46.7
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 1.3e-61 241.9 599 39.1
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 1.6e-61 241.5 412 46.1
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 2.1e-61 241.1 439 42.6
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 2.4e-60 237.7 598 39.5
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 4.5e-59 233.4 409 48.7
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 1.3e-58 231.9 605 35.2
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 2.9e-58 230.7 594 40.9
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 6.4e-58 229.6 582 38.7
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.9e-57 228.0 590 39.0
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 4.2e-57 226.9 601 38.8
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 7.1e-57 226.1 589 40.1
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 7.1e-57 226.1 590 36.3
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 9.3e-57 225.7 413 43.6
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 2.1e-56 224.6 589 37.9
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 2.1e-56 224.6 568 39.1
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 2.7e-56 224.2 405 41.2
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 3.5e-56 223.8 404 44.3
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 4.6e-56 223.4 596 42.6
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 1.3e-55 221.9 586 36.2
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 1.8e-55 221.5 413 42.6
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 8.7e-55 219.2 592 41.0
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 2.5e-54 217.6 621 35.1
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 3.3e-54 217.2 586 41.8
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 4.3e-54 216.9 594 39.2
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 9.6e-54 215.7 409 41.8
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 1.3e-53 215.3 583 36.0
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.3e-53 215.3 403 40.4
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 6.2e-53 213.0 407 41.5
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 8.2e-53 212.6 591 36.4
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 4.0e-52 210.3 488 44.1
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 4.0e-52 210.3 500 37.6
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 6.9e-52 209.5 410 41.2
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 9.0e-52 209.1 600 38.8
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 9.0e-52 209.1 400 40.8
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 2.6e-51 207.6 585 33.3
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 5.8e-51 206.5 587 35.3
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 1.3e-50 205.3 500 42.6
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 2.2e-50 204.5 303 54.1
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.2e-50 204.5 619 40.4
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 4.9e-50 203.4 588 42.3
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 6.5e-50 203.0 591 32.7
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 6.5e-50 203.0 595 41.8
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 8.4e-50 202.6 405 38.5
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 1.4e-49 201.8 403 40.4
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.2e-49 200.7 623 36.4
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 9.3e-49 199.1 603 38.3
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 2.1e-48 198.0 518 39.6
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 1.8e-47 194.9 600 32.3
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.3e-47 194.5 481 45.3
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 6.7e-47 193.0 589 33.1
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 3.3e-46 190.7 409 39.6
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 3.3e-46 190.7 409 39.6
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 7.4e-46 189.5 605 33.2
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 1.3e-45 188.7 414 40.6
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 1.8e-44 184.9 307 44.3
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 1.5e-43 181.8 406 38.7
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 7.6e-43 179.5 601 32.6
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 6.5e-42 176.4 487 37.2
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 1.4e-41 175.3 487 38.2
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 3.2e-41 174.1 567 33.3
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 3.2e-41 174.1 587 40.5
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 5.5e-41 173.3 586 36.0
MSTRG.17597 Avicennia marina HOM05D001846 ORTHO05D005785 1.6e-40 171.8 612 34.5
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 5.1e-39 166.8 486 36.8
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 6.7e-39 166.4 498 34.9
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 4.3e-38 163.7 444 35.8
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 5.7e-38 163.3 400 36.2
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 1.3e-37 162.2 404 35.6
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 2.8e-37 161.0 414 37.0
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 1.8e-36 158.3 592 31.6
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 2.4e-36 157.9 421 36.6
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 7.7e-35 152.9 404 33.7
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 4.2e-33 147.1 226 44.2
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 3.9e-31 140.6 463 30.9
MSTRG.18433 Avicennia marina HOM05D001846 ORTHO05D005785 1.3e-29 135.6 336 41.1
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 1.3e-29 135.6 588 30.4
Actinidia26798 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.2e-29 134.8 205 46.8
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 1.4e-28 132.1 233 42.9
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 1.2e-27 129.0 480 40.6
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 1.5e-27 128.6 296 44.6
AL1G59260 Arabidopsis lyrata HOM05D001846 ORTHO05D005785 4.5e-27 127.1 223 41.7
CARHR041560 Cardamine hirsuta HOM05D001846 ORTHO05D005785 5.9e-27 126.7 303 40.9
Aa31LG10G3580 Aethionema arabicum HOM05D000089 ORTHO05D005785 1.0e-26 125.9 298 40.6
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 1.0e-26 125.9 297 42.8
Sp1g38080 Schrenkiella parvula HOM05D001846 ORTHO05D005785 8.5e-26 122.9 300 42.0
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 4.2e-25 120.6 254 36.6
Gohir.A09G113600 Gossypium hirsutum HOM05D001846 ORTHO05D005785 4.2e-25 120.6 218 48.2
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 9.4e-25 119.4 592 28.4
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 6.1e-24 116.7 494 33.6
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 6.1e-24 116.7 414 32.6
FAN25G3220 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.5e-22 112.1 326 34.4
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 3.3e-22 110.9 222 38.3
BcaB07g33587 Brassica carinata HOM05D001846 ORTHO05D005785 1.7e-21 108.6 304 39.8
SGA_v2.0_scaffold247G44890 Striga asiatica HOM05D001846 ORTHO05D005785 1.7e-21 108.6 62 83.9
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 1.1e-20 105.9 262 32.4
BcaB04g17234 Brassica carinata HOM05D001846 ORTHO05D005785 3.5e-19 100.9 222 37.8
Zm00001eb008800 Zea mays HOM05D001846 ORTHO05D005785 5.0e-18 97.1 260 34.6
BraA08t32338Z Brassica rapa HOM05D001846 ORTHO05D005785 6.5e-18 96.7 220 38.6
Glyma.06G203350 Glycine max HOM05D001846 ORTHO05D005785 8.5e-18 96.3 158 44.9
BcaC01g01249 Brassica carinata HOM05D001846 ORTHO05D005785 1.1e-17 95.9 220 38.2
C03p89760 Brassica napus HOM05D001846 ORTHO05D005785 1.1e-17 95.9 220 38.2
BcaC08g43310 Brassica carinata HOM05D001846 ORTHO05D005785 2.5e-17 94.7 301 38.5
C06p06570 Brassica napus HOM05D001846 ORTHO05D005785 2.5e-17 94.7 301 38.5
BolC6t35770H Brassica oleracea HOM05D001846 ORTHO05D005785 2.5e-17 94.7 301 38.5
HPP92_007908 Vanilla planifolia HOM05D001846 ORTHO05D005785 3.2e-17 94.4 222 34.7
A08p03060 Brassica napus HOM05D001846 ORTHO05D005785 5.5e-17 93.6 219 37.9
BolC3t21298H Brassica oleracea HOM05D001846 ORTHO05D005785 7.2e-17 93.2 220 37.3
BraA06t23456Z Brassica rapa HOM05D001846 ORTHO05D005785 9.4e-17 92.8 302 33.1
A06p02500 Brassica napus HOM05D001846 ORTHO05D005785 1.2e-16 92.4 307 38.1
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.2e-16 92.4 481 26.8
Zm00001eb400050 Zea mays HOM05D001846 ORTHO05D005785 3.6e-16 90.9 263 31.9
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 1.5e-14 85.5 488 23.4
CDE05G1816 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 2.4e-12 78.2 59 64.4
Nn2g13769 Nelumbo nucifera HOM05D001846 ORTHO05D005785 5.9e-11 73.6 128 44.5
CDE05G3609 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 1.7e-10 72.0 138 42.8
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.7e-10 72.0 497 25.6
Os03g0216900 Oryza sativa ssp. japonica HOM05D001846 ORTHO05D005785 5.0e-10 70.5 180 34.4
QL02p066233 Quercus lobata HOM05D001846 ORTHO05D005785 1.1e-09 69.3 110 48.2
Nn6g35051 Nelumbo nucifera HOM05D001846 ORTHO05D005785 5.5e-09 67.0 68 50.0
MSTRG.18434 Avicennia marina HOM05D001846 ORTHO05D005785 2.3e-07 61.6 223 40.8
Zm00001eb393780 Zea mays HOM05D001846 ORTHO05D005785 1.5e-06 58.9 86 43.0


User provided reference genes

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