Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007150g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 3.9e-62 241.9 184 100.0
Nitab4.5_0002887g0060 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.8e-27 126.7 130 55.4
Sopen02g038650 Solanum pennellii HOM05D000135 ORTHO05D000816 7.7e-26 121.3 130 72.3
CAN.G473.85 Capsicum annuum HOM05D000135 ORTHO05D000816 2.2e-25 119.8 130 51.5
Peaxi162Scf00700g00017 Petunia axillaris HOM05D000135 ORTHO05D000816 5.3e-19 98.6 130 43.1
Solyc02g094000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 9.1e-19 97.8 50 94.0
PGSC0003DMG400020261 Solanum tuberosum HOM05D000135 ORTHO05D000816 9.1e-19 97.8 50 94.0
Peaxi162Scf00420g00047 Petunia axillaris HOM05D000135 ORTHO05D000816 5.5e-16 88.6 50 80.0
PGSC0003DMG400013427 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.7e-12 75.9 126 39.7
VMungo1383G0529 Vigna mungo HOM05D000135 ORTHO05D000816 5.3e-11 72.0 130 66.9
TPR.G39344 Trifolium pratense HOM05D000135 ORTHO05D000816 1.2e-10 70.9 130 69.2
Medtr6g023460 Medicago truncatula HOM05D000135 ORTHO05D000816 1.6e-10 70.5 130 34.6
CiPaw.03G053600 Carya illinoinensis HOM05D000135 ORTHO05D000816 2.0e-10 70.1 128 35.9
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 5.9e-10 68.6 122 34.4
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.9e-10 68.6 130 33.1
Sopen03g001050 Solanum pennellii HOM05D000135 ORTHO05D000816 1.3e-09 67.4 127 37.8
Lj7C609T6 Lonicera japonica HOM05D000135 ORTHO05D000816 1.7e-09 67.0 128 41.4
Phvul.001G095600 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.2e-09 66.6 130 32.3
FvH4_6g53150 Fragaria vesca HOM05D000135 ORTHO05D000816 2.9e-09 66.2 130 32.3
FAN14G0778 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.9e-09 66.2 130 32.3
Phvul.004G055200 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.8e-09 65.9 130 34.6
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 5.0e-09 65.5 126 31.7
MBI02_g10682_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 6.5e-09 65.1 123 31.7
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 6.5e-09 65.1 130 31.5
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 6.5e-09 65.1 130 50.8
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 6.5e-09 65.1 130 69.2
Oeu035215.1 Olea europaea HOM05D000135 ORTHO05D000816 8.5e-09 64.7 130 33.1
RcHm_v2.0_Chr2g0175201 Rosa chinensis HOM05D000135 ORTHO05D000816 1.5e-08 63.9 130 32.3
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 1.9e-08 63.5 130 30.8
Sabra16G0213700 Salix brachista HOM05D000135 ORTHO05D000816 1.9e-08 63.5 130 29.2
Sabra16G0213800 Salix brachista HOM05D000135 ORTHO05D000816 1.9e-08 63.5 130 29.2
Solyc03g005040.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.9e-08 63.5 127 37.0
VMungo0464G1988 Vigna mungo HOM05D000135 ORTHO05D000816 1.9e-08 63.5 130 31.5
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 3.2e-08 62.8 131 32.1
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 3.2e-08 62.8 129 54.3
CANSAT64G0052 Cannabis sativa HOM05D000135 ORTHO05D000816 4.2e-08 62.4 131 31.3
MBI01_g44779_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 4.2e-08 62.4 126 31.0
Eucgr.J02318 Eucalyptus grandis HOM05D000135 ORTHO05D000816 7.2e-08 61.6 128 32.0
FAN02G0421 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.4e-08 61.2 130 31.5
Ca_28119_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.2e-07 60.8 47 59.6
Hma1.2p1_1219F.1_g267940 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 2.7e-07 59.7 128 31.2
PGR083G0560 Punica granatum HOM05D000135 ORTHO05D000816 2.7e-07 59.7 126 30.2
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.6e-07 59.3 49 55.1
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 3.6e-07 59.3 49 55.1
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 3.6e-07 59.3 130 30.8
SalBow7G4318 Salvia bowleyana HOM05D016915 ORTHO05D000816 3.6e-07 59.3 49 59.2
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 6.1e-07 58.5 133 30.1
Prupe.5G000600 Prunus persica HOM05D000135 ORTHO05D000816 6.1e-07 58.5 122 71.3
Lalb_Chr14g0363211 Lupinus albus HOM05D000135 ORTHO05D000816 8.0e-07 58.2 125 48.0
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 8.0e-07 58.2 124 30.6
SalBow1G3513 Salvia bowleyana HOM05D016915 ORTHO05D000816 8.0e-07 58.2 49 57.1
CDE11G0527 Ceratophyllum demersum HOM05D000587 ORTHO05D000929 1.0e-06 57.8 127 29.1
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 1.0e-06 57.8 52 57.7
Cc07_g00660 Coffea canephora HOM05D000135 ORTHO05D000816 1.4e-06 57.4 49 57.1
Aa31LG4G6750 Aethionema arabicum HOM05D000135 ORTHO05D000816 1.8e-06 57.0 121 32.2
COL.COLO4_12261 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.8e-06 57.0 128 30.5
Lsat_1_v5_gn_4_185301 Lactuca sativa HOM05D000135 ORTHO05D000816 1.8e-06 57.0 131 28.2
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 1.8e-06 57.0 123 30.9
Psat3g176000 Pisum sativum HOM05D000135 ORTHO05D000816 1.8e-06 57.0 131 29.0
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.8e-06 57.0 131 31.3
Atru.chr13.16 Acer truncatum HOM05D000135 ORTHO05D000816 2.3e-06 56.6 43 58.1
MSTRG.3087 Avicennia marina HOM05D000135 ORTHO05D000816 2.3e-06 56.6 128 29.7
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 2.3e-06 56.6 48 54.2
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.3e-06 56.6 49 53.1
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 2.3e-06 56.6 122 45.1
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 2.3e-06 56.6 123 30.1
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 2.3e-06 56.6 130 30.8
ECA232G4862 Erigeron canadensis HOM05D000135 ORTHO05D000816 3.0e-06 56.2 134 49.3
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 3.0e-06 56.2 125 28.0
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.0e-06 56.2 131 31.3
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.2e-06 55.5 124 30.6
Glyma.19G088200 Glycine max HOM05D000135 ORTHO05D000816 5.2e-06 55.5 49 55.1
Hma1.2p1_1219F.1_g267950 Hydrangea macrophylla HOM05D000135 ORTHO05D000816 5.2e-06 55.5 128 30.5
SalBow1G2517 Salvia bowleyana HOM05D016915 ORTHO05D000816 5.2e-06 55.5 49 55.1
SalBow7G4752 Salvia bowleyana HOM05D016915 ORTHO05D000816 5.2e-06 55.5 49 55.1
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 6.7e-06 55.1 49 55.1
Lsat_1_v5_gn_9_1180 Lactuca sativa HOM05D000135 ORTHO05D000816 6.7e-06 55.1 131 26.0
Lj2C97T4 Lonicera japonica HOM05D000135 ORTHO05D000816 6.7e-06 55.1 123 31.7
HanXRQChr15g0474941 Helianthus annuus HOM05D000135 ORTHO05D000816 8.8e-06 54.7 131 28.2
HanXRQChr15g0486921 Helianthus annuus HOM05D000135 ORTHO05D000816 8.8e-06 54.7 131 35.1
Lj1g0014603 Lotus japonicus HOM05D000135 ORTHO05D000816 8.8e-06 54.7 134 29.9
Lalb_Chr22g0360481 Lupinus albus HOM05D000135 ORTHO05D000816 8.8e-06 54.7 130 28.5
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 8.8e-06 54.7 127 26.8
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 8.8e-06 54.7 123 30.1
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 8.8e-06 54.7 123 30.1
Oeu011957.1 Olea europaea HOM05D000135 ORTHO05D000816 8.8e-06 54.7 133 30.1


User provided reference genes

Program Settings