Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007150g0050 Nicotiana tabacum HOM05D002631 ORTHO05D002861 6.9e-90 334.0 168 100.0
PGSC0003DMG400020260 Solanum tuberosum HOM05D002631 ORTHO05D002861 1.2e-57 226.9 233 57.5
Solyc02g094030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 2.7e-54 215.7 233 54.9
Sopen02g038670 Solanum pennellii HOM05D002631 ORTHO05D002861 1.8e-53 213.0 233 54.1
Peaxi162Scf00420g00049 Petunia axillaris HOM05D002631 ORTHO05D002861 2.5e-47 192.6 256 52.0
CAN.G473.87 Capsicum annuum HOM05D002631 ORTHO05D002861 4.7e-46 188.3 244 52.0
Nitab4.5_0002887g0040 Nicotiana tabacum HOM05D002631 ORTHO05D002861 3.9e-45 185.3 97 93.8
Peaxi162Scf00166g00728 Petunia axillaris HOM05D002631 ORTHO05D002861 7.4e-44 181.0 239 55.2
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 9.7e-36 154.1 233 46.8
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 5.9e-33 144.8 229 44.1
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 7.7e-33 144.4 229 44.1
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 3.0e-29 132.5 224 42.9
Solyc03g005030.3 Solanum lycopersicum HOM05D002631 ORTHO05D002861 1.4e-26 123.6 222 39.6
PGSC0003DMG400013426 Solanum tuberosum HOM05D002631 ORTHO05D002861 2.4e-26 122.9 222 41.0
Oeu011958.2 Olea europaea HOM05D002631 ORTHO05D002861 5.4e-26 121.7 248 38.7
Sopen03g001040 Solanum pennellii HOM05D002631 ORTHO05D002861 1.6e-25 120.2 222 40.1
Actinidia30886 Actinidia chinensis HOM05D002631 ORTHO05D002861 4.5e-25 118.6 96 65.6
Dinv33351 Davidia involucrata HOM05D000172 ORTHO05D000781 3.8e-24 115.5 94 61.7
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 4.2e-23 112.1 241 36.5
TAR371G1118 Trochodendron aralioides HOM05D002631 ORTHO05D002861 4.2e-23 112.1 244 35.2
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 3.6e-22 109.0 127 48.8
SGA_v2.0_scaffold44G16907 Striga asiatica HOM05D002631 ORTHO05D002861 3.6e-22 109.0 202 40.1
CiPaw.04G035400 Carya illinoinensis HOM05D002631 ORTHO05D002861 6.1e-22 108.2 243 38.3
Cc07_g00670 Coffea canephora HOM05D002631 ORTHO05D002861 8.0e-22 107.8 238 37.0
CSS0020364 Camellia sinensis var. sinensis HOM05D002631 ORTHO05D002861 1.0e-21 107.5 96 59.4
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.8e-21 106.7 100 56.0
CAN.G1751.2 Capsicum annuum HOM05D002631 ORTHO05D002861 3.0e-21 105.9 234 37.6
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 5.2e-21 105.1 226 37.6
vmacro18333 Vaccinium macrocarpon HOM05D002631 ORTHO05D002861 5.2e-21 105.1 275 33.1
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 8.8e-21 104.4 242 36.4
FAN05G0255 Fragaria x ananassa HOM05D002631 ORTHO05D002861 2.6e-20 102.8 96 57.3
CANSAT64G0464 Cannabis sativa HOM05D002631 ORTHO05D002861 3.4e-20 102.4 134 47.8
FAN14G5847 Fragaria x ananassa HOM05D002631 ORTHO05D002861 3.4e-20 102.4 96 57.3
MBI07_g31942_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 3.4e-20 102.4 252 32.9
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 7.5e-20 101.3 213 37.1
FAN09G0528 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.7e-19 100.1 96 56.2
Actinidia04441 Actinidia chinensis HOM05D002631 ORTHO05D002861 2.2e-19 99.8 247 33.2
FAN02G3740 Fragaria x ananassa HOM05D002631 ORTHO05D002861 3.7e-19 99.0 96 55.2
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 6.3e-19 98.2 96 55.2
MELO3C014870.2 Cucumis melo HOM05D002631 ORTHO05D002861 8.3e-19 97.8 226 37.6
Actinidia05911 Actinidia chinensis HOM05D002631 ORTHO05D002861 1.4e-18 97.1 94 56.4
MD09G1013200 Malus domestica HOM05D002631 ORTHO05D002861 2.4e-18 96.3 99 53.5
Nn4g22361 Nelumbo nucifera HOM05D002631 ORTHO05D002861 2.4e-18 96.3 93 54.8
MD17G1013900 Malus domestica HOM05D002631 ORTHO05D002861 4.1e-18 95.5 227 34.8
Haze_14856 Corylus avellana HOM05D002631 ORTHO05D002861 1.2e-17 94.0 111 54.1
Oeu013645.3 Olea europaea HOM05D000172 ORTHO05D000781 1.2e-17 94.0 228 36.4
Duzib187G0830 Durio zibethinus HOM05D002631 ORTHO05D002861 2.0e-17 93.2 248 33.5
MSTRG.15564 Avicennia marina HOM05D002631 ORTHO05D002861 2.7e-17 92.8 243 35.4
Rhsim10G0007400 Rhododendron simsii HOM05D002631 ORTHO05D002861 2.7e-17 92.8 95 54.7
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 2.7e-17 92.8 233 35.2
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 3.5e-17 92.4 233 35.2
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 5.9e-17 91.7 244 36.1
Thecc.04G033600 Theobroma cacao HOM05D002631 ORTHO05D002861 5.9e-17 91.7 96 54.2
Gohir.A05G303801 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.7e-16 90.1 103 50.5
Gohir.A09G034900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.7e-16 90.1 169 40.2
Gohir.D09G035700 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.7e-16 90.1 169 40.2
Gorai.006G040600 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.7e-16 90.1 169 40.2
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 5.0e-16 88.6 152 40.8
Oeu035217.1 Olea europaea HOM05D002631 ORTHO05D002861 6.6e-16 88.2 229 32.3
Dinv10972 Davidia involucrata HOM05D002631 ORTHO05D002861 8.6e-16 87.8 235 32.8
Medtr6g023580 Medicago truncatula HOM05D002631 ORTHO05D002861 8.6e-16 87.8 100 50.0
Phvul.004G055100 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 1.1e-15 87.4 95 50.5
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 1.5e-15 87.0 205 37.1
Aqoxy5G03422 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 1.9e-15 86.7 94 48.9
Cfa007243 Carpinus fangiana HOM05D002631 ORTHO05D002861 1.9e-15 86.7 84 61.9
Lj1g0010837 Lotus japonicus HOM05D002631 ORTHO05D002861 1.9e-15 86.7 234 35.0
Glyma.05G076300 Glycine max HOM05D002631 ORTHO05D002861 2.5e-15 86.3 95 48.4
Rhsim08G0043900 Rhododendron simsii HOM05D002631 ORTHO05D002861 2.5e-15 86.3 141 41.1
MSTRG.24087 Avicennia marina HOM05D002631 ORTHO05D002861 3.3e-15 85.9 231 33.3
Duzib264G0548 Durio zibethinus HOM05D002631 ORTHO05D002861 3.3e-15 85.9 96 53.1
VMungo0464G1570 Vigna mungo HOM05D002631 ORTHO05D002861 3.3e-15 85.9 95 48.4
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 4.3e-15 85.5 229 34.1
MBI07_g46198_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 4.3e-15 85.5 139 41.7
Gohir.A12G136400 Gossypium hirsutum HOM05D002631 ORTHO05D002861 7.3e-15 84.7 103 48.5
Oeu011758.1 Olea europaea HOM05D002631 ORTHO05D002861 7.3e-15 84.7 227 34.4
Manes.17G104100 Manihot esculenta HOM05D002631 ORTHO05D002861 9.5e-15 84.3 96 52.1
TPR.G7520 Trifolium pratense HOM05D002631 ORTHO05D002861 9.5e-15 84.3 143 42.7
CiPaw.03G053800 Carya illinoinensis HOM05D002631 ORTHO05D002861 1.2e-14 84.0 100 48.0
Gorai.001G269900 Gossypium raimondii HOM05D002631 ORTHO05D002861 2.8e-14 82.8 244 33.6
TWI12G0788 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 3.6e-14 82.4 206 35.9
Psat1g085600 Pisum sativum HOM05D002631 ORTHO05D002861 4.7e-14 82.0 99 47.5
Sed0018875 Sechium edule HOM05D002631 ORTHO05D002861 4.7e-14 82.0 226 32.3
TAR629G0052 Trochodendron aralioides HOM05D002631 ORTHO05D002861 4.7e-14 82.0 94 51.1
Ca_04425_v3 Cicer arietinum L. HOM05D002631 ORTHO05D002861 6.1e-14 81.6 97 49.5
Glyma.16G058500 Glycine max HOM05D002631 ORTHO05D002861 6.1e-14 81.6 168 39.9
Glyma.19G088700 Glycine max HOM05D002631 ORTHO05D002861 6.1e-14 81.6 167 40.1
Phvul.001G095300 Phaseolus vulgaris HOM05D002631 ORTHO05D002861 6.1e-14 81.6 101 49.5
Glyma.19G074200 Glycine max HOM05D002631 ORTHO05D002861 8.0e-14 81.3 96 49.0
Eucgr.I01656 Eucalyptus grandis HOM05D002631 ORTHO05D002861 1.0e-13 80.9 95 47.4
Gohir.D04G077800 Gossypium hirsutum HOM05D002631 ORTHO05D002861 1.4e-13 80.5 97 52.6
Gorai.012G087600 Gossypium raimondii HOM05D002631 ORTHO05D002861 1.4e-13 80.5 97 52.6
Duzib147G0551 Durio zibethinus HOM05D002631 ORTHO05D002861 2.3e-13 79.7 96 53.1
HanXRQChr09g0256151 Helianthus annuus HOM05D002631 ORTHO05D002861 3.0e-13 79.3 133 40.6
GSVIVG01010390001 Vitis vinifera HOM05D002631 ORTHO05D002861 6.8e-13 78.2 95 49.5
COL.COLO4_17171 Corchorus olitorius HOM05D002631 ORTHO05D002861 1.2e-12 77.4 87 51.7
Medtr7g029620 Medicago truncatula HOM05D002631 ORTHO05D002861 2.0e-12 76.6 96 47.9
Gohir.A05G339300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.6e-12 76.3 97 48.5
Lsat_1_v5_gn_2_94100 Lactuca sativa HOM05D002631 ORTHO05D002861 2.6e-12 76.3 99 48.5
DCAR_021775 Daucus carota HOM05D002631 ORTHO05D002861 3.4e-12 75.9 223 34.1
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 3.4e-12 75.9 222 33.8
VMungo1383G3513 Vigna mungo HOM05D002631 ORTHO05D002861 3.4e-12 75.9 231 32.0
Lj7A608T54 Lonicera japonica HOM05D002631 ORTHO05D002861 5.7e-12 75.1 174 34.5
Sabra16G0213400 Salix brachista HOM05D002631 ORTHO05D002861 5.7e-12 75.1 117 41.9
GSVIVG01001809001 Vitis vinifera HOM05D002631 ORTHO05D002861 1.7e-11 73.6 131 41.2
Gohir.D07G234300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 2.2e-11 73.2 243 32.1
HanXRQChr15g0486931 Helianthus annuus HOM05D002631 ORTHO05D002861 2.9e-11 72.8 95 47.4
HanXRQChr17g0550131 Helianthus annuus HOM05D002631 ORTHO05D002861 2.9e-11 72.8 94 46.8
Atru.chr6.2535 Acer truncatum HOM05D002631 ORTHO05D002861 3.7e-11 72.4 256 30.9
Gohir.A07G227200 Gossypium hirsutum HOM05D002631 ORTHO05D002861 3.7e-11 72.4 243 31.7
MSTRG.3262 Avicennia marina HOM05D002631 ORTHO05D002861 4.9e-11 72.0 134 41.8
TPR.G38258 Trifolium pratense HOM05D002631 ORTHO05D002861 6.4e-11 71.6 139 40.3
Ah.10g032580 Amaranthus hybridus HOM05D002631 ORTHO05D002861 1.1e-10 70.9 96 44.8
Lalb_Chr21g0317531 Lupinus albus HOM05D002631 ORTHO05D002861 1.1e-10 70.9 100 40.0
Sc03g0006640 Simmondsia chinensis HOM05D002631 ORTHO05D002861 1.1e-10 70.9 107 43.9
Sc16g0003110 Simmondsia chinensis HOM05D002631 ORTHO05D002861 1.1e-10 70.9 116 41.4
Hund13051 Selenicereus undatus HOM05D002631 ORTHO05D002861 1.8e-10 70.1 190 35.3
Actinidia36186 Actinidia chinensis HOM05D002631 ORTHO05D002861 9.2e-10 67.8 94 46.8
SGA_v2.0_scaffold154G37166 Striga asiatica HOM05D002631 ORTHO05D002861 1.2e-09 67.4 96 43.8
Ciclev10016522m.g Citrus clementina HOM05D002631 ORTHO05D002861 1.6e-09 67.0 248 29.0
Lalb_Chr14g0363261 Lupinus albus HOM05D002631 ORTHO05D002861 1.6e-09 67.0 98 41.8
HanXRQChr14g0450671 Helianthus annuus HOM05D002631 ORTHO05D002861 2.0e-09 66.6 100 42.0
Potri.008G176300 Populus trichocarpa HOM05D002631 ORTHO05D002861 2.0e-09 66.6 97 41.2
ECA232G3368 Erigeron canadensis HOM05D000185 ORTHO05D000105 2.7e-09 66.2 138 36.2
EL10Ac2g03218 Beta vulgaris HOM05D002631 ORTHO05D002861 7.8e-09 64.7 101 40.6
Eucgr.J02319 Eucalyptus grandis HOM05D002631 ORTHO05D002861 1.0e-08 64.3 98 43.9
AUR62024226 Chenopodium quinoa HOM05D002631 ORTHO05D002861 1.3e-08 63.9 95 42.1
Psat7g264080 Pisum sativum HOM05D002631 ORTHO05D002861 1.7e-08 63.5 222 31.5
AUR62005516 Chenopodium quinoa HOM05D002631 ORTHO05D002861 2.3e-08 63.2 96 42.7
HanXRQChr15g0474921 Helianthus annuus HOM05D002631 ORTHO05D002861 2.3e-08 63.2 98 35.7
TWI75G1382 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 5.0e-08 62.0 155 30.3
Aqoxy3G01502 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 6.6e-08 61.6 84 45.2
PGR142G2012 Punica granatum HOM05D002631 ORTHO05D002861 6.6e-08 61.6 99 41.4
Potri.010G058700 Populus trichocarpa HOM05D002631 ORTHO05D002861 8.6e-08 61.2 120 35.0
Lsat_1_v5_gn_0_30021 Lactuca sativa HOM05D002631 ORTHO05D002861 1.5e-07 60.5 99 44.4
ECA246G3938 Erigeron canadensis HOM05D002631 ORTHO05D002861 1.9e-07 60.1 46 60.9
CDE05G3573 Ceratophyllum demersum HOM05D002631 ORTHO05D002861 2.5e-07 59.7 244 27.0
COL.COLO4_20357 Corchorus olitorius HOM05D002631 ORTHO05D002861 2.5e-07 59.7 252 29.8
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 2.5e-07 59.7 160 33.1
PGR102G0668 Punica granatum HOM05D002631 ORTHO05D002861 2.5e-07 59.7 152 30.9
Carub.0005s0544 Capsella rubella HOM05D002631 ORTHO05D002861 3.3e-07 59.3 74 47.3
PSO478G2931 Papaver somniferum HOM05D002631 ORTHO05D002861 3.3e-07 59.3 102 45.1
QL02p071781 Quercus lobata HOM05D002631 ORTHO05D002861 5.6e-07 58.5 309 27.5
unitig_21.g20478 Utricularia gibba HOM05D001287 ORTHO05D001226 5.6e-07 58.5 94 38.3
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 7.3e-07 58.2 119 38.7
MELO3C008201.2 Cucumis melo HOM05D002631 ORTHO05D002861 1.2e-06 57.4 97 42.3
CsaV3_2G034190 Cucumis sativus L. HOM05D002631 ORTHO05D002861 1.2e-06 57.4 97 42.3
Os01g0920100 Oryza sativa ssp. japonica HOM05D002631 ORTHO05D002861 1.6e-06 57.0 100 38.0
PSO782G1501 Papaver somniferum HOM05D002631 ORTHO05D002861 1.6e-06 57.0 100 44.0
PSO063G6187 Papaver somniferum HOM05D002631 ORTHO05D002861 2.1e-06 56.6 100 44.0
Zm00001eb143270 Zea mays HOM05D002631 ORTHO05D002861 2.1e-06 56.6 136 33.8
CDE05G2656 Ceratophyllum demersum HOM05D002631 ORTHO05D002861 3.6e-06 55.8 97 42.3
HPP92_023191 Vanilla planifolia HOM05D002631 ORTHO05D002861 3.6e-06 55.8 80 38.8
ClCG11G007020 Citrullus lanatus HOM05D002631 ORTHO05D002861 4.7e-06 55.5 97 42.3
Haze_12389 Corylus avellana HOM05D002631 ORTHO05D002861 4.7e-06 55.5 92 37.0
PSO017G1183 Papaver somniferum HOM05D002631 ORTHO05D002861 4.7e-06 55.5 104 45.2
Zm00001eb364520 Zea mays HOM05D002631 ORTHO05D002861 6.2e-06 55.1 130 32.3
MBI11_g07448_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D000781 8.0e-06 54.7 112 40.2


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